Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSM2Q9Y333 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LSM2Q9Y333 AC025884.2-201ENST00000553429 711 ntBASIC20.59■□□□□ 0.89
LSM2Q9Y333 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSM2Q9Y333 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LSM2Q9Y333 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSM2Q9Y333 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSM2Q9Y333 AC092068.2-201ENST00000590491 1708 ntBASIC20.58■□□□□ 0.89
LSM2Q9Y333 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
LSM2Q9Y333 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSM2Q9Y333 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LSM2Q9Y333 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
LSM2Q9Y333 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.58■□□□□ 0.89
LSM2Q9Y333 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
LSM2Q9Y333 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSM2Q9Y333 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LSM2Q9Y333 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LSM2Q9Y333 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM2Q9Y333 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.56■□□□□ 0.88
LSM2Q9Y333 AL157400.5-201ENST00000507624 621 ntBASIC20.56■□□□□ 0.88
LSM2Q9Y333 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.56■□□□□ 0.88
LSM2Q9Y333 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.56■□□□□ 0.88
LSM2Q9Y333 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM2Q9Y333 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM2Q9Y333 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM2Q9Y333 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSM2Q9Y333 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM2Q9Y333 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM2Q9Y333 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LSM2Q9Y333 GUSBP5-202ENST00000510805 1989 ntBASIC20.55■□□□□ 0.88
LSM2Q9Y333 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.55■□□□□ 0.88
LSM2Q9Y333 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSM2Q9Y333 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.54■□□□□ 0.88
LSM2Q9Y333 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.54■□□□□ 0.88
LSM2Q9Y333 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LSM2Q9Y333 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSM2Q9Y333 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LSM2Q9Y333 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.54■□□□□ 0.88
LSM2Q9Y333 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSM2Q9Y333 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LSM2Q9Y333 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LSM2Q9Y333 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSM2Q9Y333 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
LSM2Q9Y333 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSM2Q9Y333 AC127496.7-201ENST00000625110 1798 ntBASIC20.53■□□□□ 0.88
LSM2Q9Y333 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.53■□□□□ 0.88
LSM2Q9Y333 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LSM2Q9Y333 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LSM2Q9Y333 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSM2Q9Y333 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSM2Q9Y333 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSM2Q9Y333 MIR3960-201ENST00000583311 91 ntBASIC20.52■□□□□ 0.88
LSM2Q9Y333 FOXO3B-201ENST00000395675 1928 ntBASIC20.52■□□□□ 0.88
LSM2Q9Y333 ECEL1P1-201ENST00000373592 1742 ntBASIC20.52■□□□□ 0.88
LSM2Q9Y333 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LSM2Q9Y333 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSM2Q9Y333 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.52■□□□□ 0.87
LSM2Q9Y333 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LSM2Q9Y333 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LSM2Q9Y333 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LSM2Q9Y333 AC137767.1-201ENST00000602918 1920 ntBASIC20.51■□□□□ 0.87
LSM2Q9Y333 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LSM2Q9Y333 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM2Q9Y333 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM2Q9Y333 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSM2Q9Y333 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.51■□□□□ 0.87
LSM2Q9Y333 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LSM2Q9Y333 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.51■□□□□ 0.87
LSM2Q9Y333 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LSM2Q9Y333 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSM2Q9Y333 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.5■□□□□ 0.87
LSM2Q9Y333 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms