Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MACF1Q9UPN3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 AL138724.1-201ENST00000606771 1088 ntBASIC9.81□□□□□ -0.84
MACF1Q9UPN3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 AC069152.1-201ENST00000438030 544 ntBASIC9.81□□□□□ -0.84
MACF1Q9UPN3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
MACF1Q9UPN3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 GRAMD4P2-201ENST00000423297 1097 ntBASIC9.8□□□□□ -0.84
MACF1Q9UPN3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 AP006294.2-201ENST00000641667 209 ntBASIC9.8□□□□□ -0.84
MACF1Q9UPN3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC9.8□□□□□ -0.84
MACF1Q9UPN3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 BX842568.3-201ENST00000418104 571 ntBASIC9.79□□□□□ -0.84
MACF1Q9UPN3 DUSP5P2-201ENST00000426873 1033 ntBASIC9.79□□□□□ -0.84
MACF1Q9UPN3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 PRORSD1P-201ENST00000295112 541 ntBASIC9.79□□□□□ -0.84
MACF1Q9UPN3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 SLC7A5P2-201ENST00000553010 536 ntBASIC9.79□□□□□ -0.84
MACF1Q9UPN3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC9.79□□□□□ -0.84
MACF1Q9UPN3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 KRT18P61-201ENST00000585825 1298 ntBASIC9.78□□□□□ -0.84
MACF1Q9UPN3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 AC099791.2-201ENST00000605725 427 ntBASIC9.78□□□□□ -0.84
MACF1Q9UPN3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 AP004833.2-201ENST00000532228 1454 ntBASIC9.78□□□□□ -0.84
MACF1Q9UPN3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC9.78□□□□□ -0.84
MACF1Q9UPN3 KRT18P10-201ENST00000388836 1287 ntBASIC9.77□□□□□ -0.84
MACF1Q9UPN3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
MACF1Q9UPN3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
MACF1Q9UPN3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
MACF1Q9UPN3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
MACF1Q9UPN3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
MACF1Q9UPN3 DBI-210ENST00000542275 757 ntTSL 5 BASIC9.77□□□□□ -0.84
MACF1Q9UPN3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms