Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MRPL39Q9NYK5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL39Q9NYK5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL39Q9NYK5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
MRPL39Q9NYK5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL39Q9NYK5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MRPL39Q9NYK5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.02■□□□□ 0.96
MRPL39Q9NYK5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 LINC01124-201ENST00000409786 2117 ntBASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 DUX4L18-201ENST00000553347 1267 ntBASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPL39Q9NYK5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21■□□□□ 0.95
MRPL39Q9NYK5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MRPL39Q9NYK5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MRPL39Q9NYK5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21■□□□□ 0.95
MRPL39Q9NYK5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21■□□□□ 0.95
MRPL39Q9NYK5 AC141586.4-201ENST00000624558 1573 ntBASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 AC004987.1-201ENST00000428627 508 ntBASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 ATP5G2P3-201ENST00000429083 425 ntBASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 AC139795.1-202ENST00000500444 432 ntBASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 AC019171.1-201ENST00000601251 1056 ntBASIC20.99■□□□□ 0.95
MRPL39Q9NYK5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 CLDN5-201ENST00000403084 2357 ntBASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPL39Q9NYK5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL39Q9NYK5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 AC090877.2-201ENST00000558441 1738 ntBASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL39Q9NYK5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
MRPL39Q9NYK5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 TSPY13P-201ENST00000338964 914 ntBASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 AC068473.5-201ENST00000616428 2072 ntBASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 HLA-L-211ENST00000482052 1765 ntBASIC20.95■□□□□ 0.94
MRPL39Q9NYK5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
MRPL39Q9NYK5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms