Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC42SE1Q9NRR8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC42SE1Q9NRR8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC42SE1Q9NRR8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC42SE1Q9NRR8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.02□□□□□ -0.48
CDC42SE1Q9NRR8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC42SE1Q9NRR8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE1Q9NRR8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 AC096887.2-201ENST00000623443 1957 ntBASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE1Q9NRR8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE1Q9NRR8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 NFE2L3P1-201ENST00000588207 1959 ntBASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE1Q9NRR8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms