Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TM9SF3Q9HD45 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TM9SF3Q9HD45 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TM9SF3Q9HD45 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TM9SF3Q9HD45 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TM9SF3Q9HD45 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TM9SF3Q9HD45 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 AC092803.2-201ENST00000564287 1899 ntBASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TM9SF3Q9HD45 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TM9SF3Q9HD45 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.09■■□□□ 1.29
TM9SF3Q9HD45 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TM9SF3Q9HD45 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.08■■□□□ 1.28
TM9SF3Q9HD45 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.08■■□□□ 1.28
TM9SF3Q9HD45 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
TM9SF3Q9HD45 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TM9SF3Q9HD45 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 PBX2P1-201ENST00000493219 1291 ntBASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 AC106739.1-201ENST00000617035 715 ntBASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TM9SF3Q9HD45 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TM9SF3Q9HD45 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.05■■□□□ 1.28
TM9SF3Q9HD45 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TM9SF3Q9HD45 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 AC010501.1-201ENST00000606270 1962 ntBASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TM9SF3Q9HD45 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 UNC93B3-201ENST00000308076 687 ntBASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
TM9SF3Q9HD45 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
TM9SF3Q9HD45 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TM9SF3Q9HD45 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms