Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SP110Q9HB58 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.64■■□□□ 1.37
SP110Q9HB58 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.63■■□□□ 1.37
SP110Q9HB58 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.63■■□□□ 1.37
SP110Q9HB58 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SP110Q9HB58 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SP110Q9HB58 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.63■■□□□ 1.37
SP110Q9HB58 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.63■■□□□ 1.37
SP110Q9HB58 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.62■■□□□ 1.37
SP110Q9HB58 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SP110Q9HB58 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SP110Q9HB58 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SP110Q9HB58 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SP110Q9HB58 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.61■■□□□ 1.37
SP110Q9HB58 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SP110Q9HB58 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SP110Q9HB58 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SP110Q9HB58 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.61■■□□□ 1.37
SP110Q9HB58 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.61■■□□□ 1.37
SP110Q9HB58 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SP110Q9HB58 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SP110Q9HB58 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SP110Q9HB58 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
SP110Q9HB58 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 KRT125P-201ENST00000546827 989 ntBASIC23.6■■□□□ 1.37
SP110Q9HB58 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.6■■□□□ 1.37
SP110Q9HB58 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SP110Q9HB58 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.59■■□□□ 1.37
SP110Q9HB58 Z92544.1-202ENST00000571933 1220 ntBASIC23.59■■□□□ 1.37
SP110Q9HB58 AL035685.1-201ENST00000636663 812 ntBASIC23.59■■□□□ 1.37
SP110Q9HB58 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SP110Q9HB58 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SP110Q9HB58 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SP110Q9HB58 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SP110Q9HB58 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SP110Q9HB58 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SP110Q9HB58 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.58■■□□□ 1.37
SP110Q9HB58 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SP110Q9HB58 AC141586.4-201ENST00000624558 1573 ntBASIC23.58■■□□□ 1.37
SP110Q9HB58 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SP110Q9HB58 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SP110Q9HB58 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.58■■□□□ 1.37
SP110Q9HB58 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SP110Q9HB58 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.58■■□□□ 1.37
SP110Q9HB58 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.58■■□□□ 1.37
SP110Q9HB58 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.58■■□□□ 1.37
SP110Q9HB58 AL022069.1-201ENST00000568025 1636 ntBASIC23.58■■□□□ 1.36
SP110Q9HB58 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
SP110Q9HB58 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SP110Q9HB58 LINC00543-201ENST00000567234 1845 ntBASIC23.57■■□□□ 1.36
SP110Q9HB58 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.57■■□□□ 1.36
SP110Q9HB58 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.57■■□□□ 1.36
SP110Q9HB58 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SP110Q9HB58 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SP110Q9HB58 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SP110Q9HB58 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SP110Q9HB58 AC021242.3-201ENST00000607598 1377 ntBASIC23.56■■□□□ 1.36
SP110Q9HB58 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SP110Q9HB58 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SP110Q9HB58 AC239859.2-201ENST00000444165 318 ntBASIC23.56■■□□□ 1.36
SP110Q9HB58 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.56■■□□□ 1.36
SP110Q9HB58 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.56■■□□□ 1.36
SP110Q9HB58 AC131274.2-201ENST00000580697 1507 ntBASIC23.55■■□□□ 1.36
SP110Q9HB58 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SP110Q9HB58 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.55■■□□□ 1.36
SP110Q9HB58 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SP110Q9HB58 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.55■■□□□ 1.36
SP110Q9HB58 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.55■■□□□ 1.36
SP110Q9HB58 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.55■■□□□ 1.36
SP110Q9HB58 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SP110Q9HB58 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SP110Q9HB58 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SP110Q9HB58 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SP110Q9HB58 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SP110Q9HB58 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.54■■□□□ 1.36
SP110Q9HB58 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SP110Q9HB58 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.54■■□□□ 1.36
SP110Q9HB58 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SP110Q9HB58 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SP110Q9HB58 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.53■■□□□ 1.36
SP110Q9HB58 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SP110Q9HB58 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SP110Q9HB58 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SP110Q9HB58 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms