Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42EP4Q9H3Q1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDC42EP4Q9H3Q1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDC42EP4Q9H3Q1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 AL117328.2-201ENST00000624617 1940 ntBASIC23.53■■□□□ 1.36
CDC42EP4Q9H3Q1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDC42EP4Q9H3Q1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.51■■□□□ 1.35
CDC42EP4Q9H3Q1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 CLDN5-201ENST00000403084 2357 ntBASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42EP4Q9H3Q1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CDC42EP4Q9H3Q1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.49■■□□□ 1.35
CDC42EP4Q9H3Q1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42EP4Q9H3Q1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42EP4Q9H3Q1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.49■■□□□ 1.35
CDC42EP4Q9H3Q1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.49■■□□□ 1.35
CDC42EP4Q9H3Q1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42EP4Q9H3Q1 AC007029.1-201ENST00000604183 313 ntBASIC23.48■■□□□ 1.35
CDC42EP4Q9H3Q1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42EP4Q9H3Q1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CDC42EP4Q9H3Q1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 ANOS2P-203ENST00000472227 1816 ntBASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42EP4Q9H3Q1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 RAP2CP1-202ENST00000605179 643 ntBASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 AC233723.2-201ENST00000623798 2106 ntBASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDC42EP4Q9H3Q1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CDC42EP4Q9H3Q1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 KRT18P10-201ENST00000388836 1287 ntBASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDC42EP4Q9H3Q1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDC42EP4Q9H3Q1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CDC42EP4Q9H3Q1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CDC42EP4Q9H3Q1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms