Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV9Q99603 NFE2L3P1-201ENST00000588207 1959 ntBASIC18■□□□□ 0.47
TRGV9Q99603 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRGV9Q99603 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV9Q99603 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
TRGV9Q99603 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV9Q99603 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV9Q99603 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV9Q99603 AC090877.2-201ENST00000558441 1738 ntBASIC17.99■□□□□ 0.47
TRGV9Q99603 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRGV9Q99603 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.99■□□□□ 0.47
TRGV9Q99603 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.99■□□□□ 0.47
TRGV9Q99603 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV9Q99603 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV9Q99603 AL161729.1-201ENST00000604104 1402 ntBASIC17.98■□□□□ 0.47
TRGV9Q99603 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.98■□□□□ 0.47
TRGV9Q99603 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV9Q99603 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV9Q99603 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV9Q99603 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
TRGV9Q99603 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV9Q99603 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV9Q99603 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRGV9Q99603 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRGV9Q99603 AC018755.3-202ENST00000596210 929 ntBASIC17.97■□□□□ 0.47
TRGV9Q99603 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV9Q99603 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV9Q99603 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRGV9Q99603 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV9Q99603 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TRGV9Q99603 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TRGV9Q99603 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV9Q99603 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV9Q99603 AL592295.1-201ENST00000400984 884 ntBASIC17.96■□□□□ 0.47
TRGV9Q99603 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.96■□□□□ 0.47
TRGV9Q99603 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TRGV9Q99603 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.96■□□□□ 0.47
TRGV9Q99603 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV9Q99603 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV9Q99603 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV9Q99603 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV9Q99603 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.95■□□□□ 0.46
TRGV9Q99603 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRGV9Q99603 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRGV9Q99603 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRGV9Q99603 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRGV9Q99603 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 RNF126P1-201ENST00000567452 1320 ntBASIC17.95■□□□□ 0.46
TRGV9Q99603 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV9Q99603 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TRGV9Q99603 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRGV9Q99603 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV9Q99603 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV9Q99603 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV9Q99603 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV9Q99603 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.93■□□□□ 0.46
TRGV9Q99603 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.93■□□□□ 0.46
TRGV9Q99603 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.93■□□□□ 0.46
TRGV9Q99603 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.93■□□□□ 0.46
TRGV9Q99603 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV9Q99603 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV9Q99603 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.93■□□□□ 0.46
TRGV9Q99603 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV9Q99603 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.93■□□□□ 0.46
TRGV9Q99603 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV9Q99603 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV9Q99603 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 AC087393.1-201ENST00000582896 145 ntBASIC17.92■□□□□ 0.46
TRGV9Q99603 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRGV9Q99603 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV9Q99603 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV9Q99603 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRGV9Q99603 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.91■□□□□ 0.46
TRGV9Q99603 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms