Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NAF1Q96HR8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NAF1Q96HR8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.13■■□□□ 1.29
NAF1Q96HR8 Z92544.1-202ENST00000571933 1220 ntBASIC23.13■■□□□ 1.29
NAF1Q96HR8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NAF1Q96HR8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
NAF1Q96HR8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NAF1Q96HR8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NAF1Q96HR8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.12■■□□□ 1.29
NAF1Q96HR8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NAF1Q96HR8 KRT125P-201ENST00000546827 989 ntBASIC23.12■■□□□ 1.29
NAF1Q96HR8 AP004609.3-201ENST00000610705 1884 ntBASIC23.12■■□□□ 1.29
NAF1Q96HR8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NAF1Q96HR8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NAF1Q96HR8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NAF1Q96HR8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NAF1Q96HR8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NAF1Q96HR8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NAF1Q96HR8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.11■■□□□ 1.29
NAF1Q96HR8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.11■■□□□ 1.29
NAF1Q96HR8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.11■■□□□ 1.29
NAF1Q96HR8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
NAF1Q96HR8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
NAF1Q96HR8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NAF1Q96HR8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NAF1Q96HR8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.09■■□□□ 1.29
NAF1Q96HR8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.09■■□□□ 1.29
NAF1Q96HR8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NAF1Q96HR8 AC087393.1-201ENST00000582896 145 ntBASIC23.09■■□□□ 1.29
NAF1Q96HR8 AC019171.1-201ENST00000601251 1056 ntBASIC23.09■■□□□ 1.29
NAF1Q96HR8 MIR4787-201ENST00000607364 84 ntBASIC23.09■■□□□ 1.29
NAF1Q96HR8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NAF1Q96HR8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.08■■□□□ 1.29
NAF1Q96HR8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NAF1Q96HR8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NAF1Q96HR8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
NAF1Q96HR8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.08■■□□□ 1.29
NAF1Q96HR8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NAF1Q96HR8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
NAF1Q96HR8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NAF1Q96HR8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
NAF1Q96HR8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NAF1Q96HR8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NAF1Q96HR8 AC097639.1-201ENST00000565519 1891 ntBASIC23.07■■□□□ 1.28
NAF1Q96HR8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NAF1Q96HR8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NAF1Q96HR8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
NAF1Q96HR8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NAF1Q96HR8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NAF1Q96HR8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NAF1Q96HR8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NAF1Q96HR8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NAF1Q96HR8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NAF1Q96HR8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
NAF1Q96HR8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NAF1Q96HR8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NAF1Q96HR8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
NAF1Q96HR8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NAF1Q96HR8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.06■■□□□ 1.28
NAF1Q96HR8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.06■■□□□ 1.28
NAF1Q96HR8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NAF1Q96HR8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NAF1Q96HR8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.05■■□□□ 1.28
NAF1Q96HR8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NAF1Q96HR8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NAF1Q96HR8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NAF1Q96HR8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NAF1Q96HR8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.04■■□□□ 1.28
NAF1Q96HR8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NAF1Q96HR8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NAF1Q96HR8 BX664725.1-201ENST00000438252 379 ntBASIC23.04■■□□□ 1.28
NAF1Q96HR8 KRT16P3-201ENST00000439127 1283 ntBASIC23.04■■□□□ 1.28
NAF1Q96HR8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NAF1Q96HR8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
NAF1Q96HR8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.04■■□□□ 1.28
NAF1Q96HR8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.04■■□□□ 1.28
NAF1Q96HR8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NAF1Q96HR8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.04■■□□□ 1.28
NAF1Q96HR8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.03■■□□□ 1.28
NAF1Q96HR8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.03■■□□□ 1.28
NAF1Q96HR8 UNC93B8-201ENST00000511903 705 ntBASIC23.03■■□□□ 1.28
NAF1Q96HR8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
NAF1Q96HR8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
NAF1Q96HR8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.03■■□□□ 1.28
NAF1Q96HR8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NAF1Q96HR8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NAF1Q96HR8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NAF1Q96HR8 RPS2P7-201ENST00000447334 885 ntBASIC23.02■■□□□ 1.28
NAF1Q96HR8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.02■■□□□ 1.28
NAF1Q96HR8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms