Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC46Q96FV0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC46Q96FV0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC46Q96FV0 MIR638-201ENST00000385237 100 ntBASIC20.61■□□□□ 0.89
LRRC46Q96FV0 MIR935-201ENST00000401179 91 ntBASIC20.61■□□□□ 0.89
LRRC46Q96FV0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC46Q96FV0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC46Q96FV0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC46Q96FV0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC46Q96FV0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 AC091060.1-201ENST00000623524 1766 ntBASIC20.59■□□□□ 0.89
LRRC46Q96FV0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.59■□□□□ 0.89
LRRC46Q96FV0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC46Q96FV0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC46Q96FV0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
LRRC46Q96FV0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC46Q96FV0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.58■□□□□ 0.89
LRRC46Q96FV0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.58■□□□□ 0.89
LRRC46Q96FV0 AC133561.1-201ENST00000568600 2415 ntBASIC20.58■□□□□ 0.88
LRRC46Q96FV0 AC090877.2-201ENST00000558441 1738 ntBASIC20.58■□□□□ 0.88
LRRC46Q96FV0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.58■□□□□ 0.88
LRRC46Q96FV0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC46Q96FV0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC46Q96FV0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 AF131216.4-201ENST00000638924 1588 ntBASIC20.55■□□□□ 0.88
LRRC46Q96FV0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 MIR6722-201ENST00000617286 78 ntBASIC20.55■□□□□ 0.88
LRRC46Q96FV0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.55■□□□□ 0.88
LRRC46Q96FV0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms