Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCD3Q96EY7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PTCD3Q96EY7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
PTCD3Q96EY7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PTCD3Q96EY7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PTCD3Q96EY7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.9■■□□□ 1.26
PTCD3Q96EY7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PTCD3Q96EY7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCD3Q96EY7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PTCD3Q96EY7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PTCD3Q96EY7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PTCD3Q96EY7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 U85056.1-201ENST00000616429 682 ntBASIC22.89■■□□□ 1.25
PTCD3Q96EY7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCD3Q96EY7 AL117328.2-201ENST00000624617 1940 ntBASIC22.88■■□□□ 1.25
PTCD3Q96EY7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.88■■□□□ 1.25
PTCD3Q96EY7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCD3Q96EY7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.88■■□□□ 1.25
PTCD3Q96EY7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCD3Q96EY7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PTCD3Q96EY7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD3Q96EY7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD3Q96EY7 ABHD17AP5-201ENST00000580133 923 ntBASIC22.86■■□□□ 1.25
PTCD3Q96EY7 AC018755.3-202ENST00000596210 929 ntBASIC22.86■■□□□ 1.25
PTCD3Q96EY7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PTCD3Q96EY7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD3Q96EY7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PTCD3Q96EY7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD3Q96EY7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 SPCS2P3-201ENST00000500401 656 ntBASIC22.84■■□□□ 1.25
PTCD3Q96EY7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCD3Q96EY7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD3Q96EY7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.83■■□□□ 1.25
PTCD3Q96EY7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD3Q96EY7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCD3Q96EY7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PTCD3Q96EY7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD3Q96EY7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PTCD3Q96EY7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCD3Q96EY7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 DUX4L9-201ENST00000449051 1259 ntBASIC22.81■■□□□ 1.24
PTCD3Q96EY7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 MIR6765-201ENST00000614092 87 ntBASIC22.81■■□□□ 1.24
PTCD3Q96EY7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD3Q96EY7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.8■■□□□ 1.24
PTCD3Q96EY7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCD3Q96EY7 KRT18P60-201ENST00000312876 1297 ntBASIC22.8■■□□□ 1.24
PTCD3Q96EY7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.8■■□□□ 1.24
PTCD3Q96EY7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PTCD3Q96EY7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms