Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.61
CCDC127Q96BQ5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC127Q96BQ5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC127Q96BQ5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC127Q96BQ5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.13■■□□□ 1.61
CCDC127Q96BQ5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC127Q96BQ5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCDC127Q96BQ5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 AC009299.2-201ENST00000482477 511 ntBASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC127Q96BQ5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC127Q96BQ5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC127Q96BQ5 LINC00543-201ENST00000567234 1845 ntBASIC25.11■■□□□ 1.61
CCDC127Q96BQ5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC127Q96BQ5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 AC137630.3-201ENST00000607245 391 ntBASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC127Q96BQ5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC127Q96BQ5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 AC093323.1-202ENST00000635031 2045 ntBASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC127Q96BQ5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC127Q96BQ5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC127Q96BQ5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 BX664725.1-201ENST00000438252 379 ntBASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC127Q96BQ5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC127Q96BQ5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 AL035685.1-201ENST00000636663 812 ntBASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 AC131274.2-201ENST00000580697 1507 ntBASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CCDC127Q96BQ5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 AC239859.2-201ENST00000444165 318 ntBASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 AC141586.4-201ENST00000624558 1573 ntBASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CCDC127Q96BQ5 AC004812.2-201ENST00000611079 2094 ntBASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 AL022069.1-201ENST00000568025 1636 ntBASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 AC021242.3-201ENST00000607598 1377 ntBASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CCDC127Q96BQ5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC127Q96BQ5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC127Q96BQ5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC127Q96BQ5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC127Q96BQ5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms