Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DYNC2LI1Q8TCX1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.52■□□□□ 0.87
DYNC2LI1Q8TCX1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DYNC2LI1Q8TCX1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.5■□□□□ 0.87
DYNC2LI1Q8TCX1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 AC092068.2-201ENST00000590491 1708 ntBASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DYNC2LI1Q8TCX1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
DYNC2LI1Q8TCX1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DYNC2LI1Q8TCX1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 AC136428.2-201ENST00000563187 214 ntBASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DYNC2LI1Q8TCX1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
DYNC2LI1Q8TCX1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DYNC2LI1Q8TCX1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DYNC2LI1Q8TCX1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DYNC2LI1Q8TCX1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.42■□□□□ 0.86
DYNC2LI1Q8TCX1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms