Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 AC099791.1-201ENST00000416440 715 ntBASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.85■■□□□ 1.09
SNIP1Q8TAD8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 AC034268.1-201ENST00000441047 882 ntBASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNIP1Q8TAD8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNIP1Q8TAD8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.83■■□□□ 1.09
SNIP1Q8TAD8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SNIP1Q8TAD8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.83■■□□□ 1.09
SNIP1Q8TAD8 AL137784.2-201ENST00000607332 1000 ntBASIC21.83■■□□□ 1.09
SNIP1Q8TAD8 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.83■■□□□ 1.09
SNIP1Q8TAD8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.83■■□□□ 1.08
SNIP1Q8TAD8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNIP1Q8TAD8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 AC022517.1-201ENST00000592429 346 ntBASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 IKBKGP1-201ENST00000612193 1073 ntBASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNIP1Q8TAD8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNIP1Q8TAD8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 AC099791.2-201ENST00000605725 427 ntBASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.8■■□□□ 1.08
SNIP1Q8TAD8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.79■■□□□ 1.08
SNIP1Q8TAD8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.79■■□□□ 1.08
SNIP1Q8TAD8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNIP1Q8TAD8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNIP1Q8TAD8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNIP1Q8TAD8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SNIP1Q8TAD8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SNIP1Q8TAD8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 SLC47A1P1-202ENST00000449666 945 ntBASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNIP1Q8TAD8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.76■■□□□ 1.07
SNIP1Q8TAD8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms