Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP43Q8NFH3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NUP43Q8NFH3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.6■■□□□ 1.05
NUP43Q8NFH3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUP43Q8NFH3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NUP43Q8NFH3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP43Q8NFH3 AC120024.1-201ENST00000562672 995 ntBASIC21.59■■□□□ 1.05
NUP43Q8NFH3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NUP43Q8NFH3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NUP43Q8NFH3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NUP43Q8NFH3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
NUP43Q8NFH3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.58■■□□□ 1.05
NUP43Q8NFH3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUP43Q8NFH3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUP43Q8NFH3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUP43Q8NFH3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 KRT18P24-201ENST00000344739 1156 ntBASIC21.56■■□□□ 1.04
NUP43Q8NFH3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NUP43Q8NFH3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NUP43Q8NFH3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NUP43Q8NFH3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUP43Q8NFH3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.55■■□□□ 1.04
NUP43Q8NFH3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NUP43Q8NFH3 MIR4508-201ENST00000584178 70 ntBASIC21.55■■□□□ 1.04
NUP43Q8NFH3 THA1P-201ENST00000590384 1145 ntBASIC21.55■■□□□ 1.04
NUP43Q8NFH3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUP43Q8NFH3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUP43Q8NFH3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.52■■□□□ 1.04
NUP43Q8NFH3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUP43Q8NFH3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.52■■□□□ 1.04
NUP43Q8NFH3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUP43Q8NFH3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NUP43Q8NFH3 KRT8P33-201ENST00000508125 1423 ntBASIC21.52■■□□□ 1.04
NUP43Q8NFH3 AL161729.1-201ENST00000604104 1402 ntBASIC21.52■■□□□ 1.04
NUP43Q8NFH3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.52■■□□□ 1.03
NUP43Q8NFH3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NUP43Q8NFH3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.52■■□□□ 1.03
NUP43Q8NFH3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NUP43Q8NFH3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP43Q8NFH3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUP43Q8NFH3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUP43Q8NFH3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NUP43Q8NFH3 AC103834.1-201ENST00000520383 144 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms