Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PSD4Q8NDX1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PSD4Q8NDX1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PSD4Q8NDX1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
PSD4Q8NDX1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PSD4Q8NDX1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PSD4Q8NDX1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 BX664725.1-201ENST00000438252 379 ntBASIC21.63■■□□□ 1.05
PSD4Q8NDX1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.63■■□□□ 1.05
PSD4Q8NDX1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 AC011551.1-201ENST00000614101 683 ntBASIC21.62■■□□□ 1.05
PSD4Q8NDX1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.62■■□□□ 1.05
PSD4Q8NDX1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PSD4Q8NDX1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PSD4Q8NDX1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PSD4Q8NDX1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PSD4Q8NDX1 KRT125P-201ENST00000546827 989 ntBASIC21.61■■□□□ 1.05
PSD4Q8NDX1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PSD4Q8NDX1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSD4Q8NDX1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSD4Q8NDX1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
PSD4Q8NDX1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSD4Q8NDX1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSD4Q8NDX1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.59■■□□□ 1.05
PSD4Q8NDX1 MIR4281-201ENST00000580852 62 ntBASIC21.59■■□□□ 1.05
PSD4Q8NDX1 AC137630.3-201ENST00000607245 391 ntBASIC21.59■■□□□ 1.05
PSD4Q8NDX1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSD4Q8NDX1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PSD4Q8NDX1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.58■■□□□ 1.04
PSD4Q8NDX1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PSD4Q8NDX1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSD4Q8NDX1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 MIR4787-201ENST00000607364 84 ntBASIC21.56■■□□□ 1.04
PSD4Q8NDX1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.56■■□□□ 1.04
PSD4Q8NDX1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PSD4Q8NDX1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PSD4Q8NDX1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.55■■□□□ 1.04
PSD4Q8NDX1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PSD4Q8NDX1 LINC00543-201ENST00000567234 1845 ntBASIC21.55■■□□□ 1.04
PSD4Q8NDX1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PSD4Q8NDX1 AC012676.1-201ENST00000574705 1949 ntBASIC21.55■■□□□ 1.04
PSD4Q8NDX1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.55■■□□□ 1.04
PSD4Q8NDX1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms