Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 AC239859.2-201ENST00000444165 318 ntBASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC146Q8IYE0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC146Q8IYE0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.7■■■□□ 2.51
CCDC146Q8IYE0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC146Q8IYE0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
CCDC146Q8IYE0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC146Q8IYE0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.7■■■□□ 2.5
CCDC146Q8IYE0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC146Q8IYE0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC146Q8IYE0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
CCDC146Q8IYE0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC146Q8IYE0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.69■■■□□ 2.5
CCDC146Q8IYE0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC146Q8IYE0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC146Q8IYE0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC146Q8IYE0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC146Q8IYE0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC146Q8IYE0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
CCDC146Q8IYE0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC146Q8IYE0 AC131274.2-201ENST00000580697 1507 ntBASIC30.68■■■□□ 2.5
CCDC146Q8IYE0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC146Q8IYE0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CCDC146Q8IYE0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.67■■■□□ 2.5
CCDC146Q8IYE0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC146Q8IYE0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC146Q8IYE0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCDC146Q8IYE0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 BX664725.1-201ENST00000438252 379 ntBASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 AC021242.3-201ENST00000607598 1377 ntBASIC30.66■■■□□ 2.5
CCDC146Q8IYE0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC146Q8IYE0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC146Q8IYE0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
CCDC146Q8IYE0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC146Q8IYE0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC146Q8IYE0 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.62■■■□□ 2.49
CCDC146Q8IYE0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC146Q8IYE0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC146Q8IYE0 AC093323.1-202ENST00000635031 2045 ntBASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 AC004812.2-201ENST00000611079 2094 ntBASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 LINC00543-201ENST00000567234 1845 ntBASIC30.61■■■□□ 2.49
CCDC146Q8IYE0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 MIR4787-201ENST00000607364 84 ntBASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC146Q8IYE0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 Z92544.1-202ENST00000571933 1220 ntBASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC146Q8IYE0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.58■■■□□ 2.49
CCDC146Q8IYE0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.58■■■□□ 2.49
CCDC146Q8IYE0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
CCDC146Q8IYE0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC146Q8IYE0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CCDC146Q8IYE0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC146Q8IYE0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.57■■■□□ 2.48
CCDC146Q8IYE0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.57■■■□□ 2.48
CCDC146Q8IYE0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.57■■■□□ 2.48
CCDC146Q8IYE0 KRT125P-201ENST00000546827 989 ntBASIC30.57■■■□□ 2.48
CCDC146Q8IYE0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms