Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 AIRN-201ENST00000601203 4374 ntBASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 CA15P2-201ENST00000611168 834 ntBASIC20.93■□□□□ 0.94
RP1L1Q8IWN7 ERN1-208ENST00000606895 2068 ntBASIC20.92■□□□□ 0.94
RP1L1Q8IWN7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RP1L1Q8IWN7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RP1L1Q8IWN7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.92■□□□□ 0.94
RP1L1Q8IWN7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RP1L1Q8IWN7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.91■□□□□ 0.94
RP1L1Q8IWN7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.91■□□□□ 0.94
RP1L1Q8IWN7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.91■□□□□ 0.94
RP1L1Q8IWN7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RP1L1Q8IWN7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 AC008764.7-201ENST00000593779 1081 ntBASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RP1L1Q8IWN7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 AC011298.3-201ENST00000615796 283 ntBASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 RARRES2P11-201ENST00000635158 484 ntBASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RP1L1Q8IWN7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.89■□□□□ 0.93
RP1L1Q8IWN7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RP1L1Q8IWN7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RP1L1Q8IWN7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RP1L1Q8IWN7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RP1L1Q8IWN7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 AL138724.1-201ENST00000606771 1088 ntBASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 AC090877.2-201ENST00000558441 1738 ntBASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RP1L1Q8IWN7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RP1L1Q8IWN7 AC096887.2-201ENST00000623443 1957 ntBASIC20.87■□□□□ 0.93
RP1L1Q8IWN7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.87■□□□□ 0.93
RP1L1Q8IWN7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.87■□□□□ 0.93
RP1L1Q8IWN7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RP1L1Q8IWN7 AC022517.1-201ENST00000592429 346 ntBASIC20.87■□□□□ 0.93
RP1L1Q8IWN7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RP1L1Q8IWN7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RP1L1Q8IWN7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.86■□□□□ 0.93
RP1L1Q8IWN7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RP1L1Q8IWN7 MIR4767-201ENST00000582827 78 ntBASIC20.86■□□□□ 0.93
RP1L1Q8IWN7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.86■□□□□ 0.93
RP1L1Q8IWN7 AC097639.1-201ENST00000565519 1891 ntBASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.85■□□□□ 0.93
RP1L1Q8IWN7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RP1L1Q8IWN7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RP1L1Q8IWN7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RP1L1Q8IWN7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms