Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
SFR1Q86XK3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SFR1Q86XK3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.57■■□□□ 1.68
SFR1Q86XK3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SFR1Q86XK3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.57■■□□□ 1.68
SFR1Q86XK3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.57■■□□□ 1.68
SFR1Q86XK3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.57■■□□□ 1.68
SFR1Q86XK3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.57■■□□□ 1.68
SFR1Q86XK3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SFR1Q86XK3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SFR1Q86XK3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFR1Q86XK3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFR1Q86XK3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFR1Q86XK3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.56■■□□□ 1.68
SFR1Q86XK3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
SFR1Q86XK3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SFR1Q86XK3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.56■■□□□ 1.68
SFR1Q86XK3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SFR1Q86XK3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SFR1Q86XK3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SFR1Q86XK3 AC004812.2-201ENST00000611079 2094 ntBASIC25.56■■□□□ 1.68
SFR1Q86XK3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFR1Q86XK3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SFR1Q86XK3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFR1Q86XK3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.55■■□□□ 1.68
SFR1Q86XK3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.55■■□□□ 1.68
SFR1Q86XK3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFR1Q86XK3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFR1Q86XK3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SFR1Q86XK3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.55■■□□□ 1.68
SFR1Q86XK3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFR1Q86XK3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFR1Q86XK3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SFR1Q86XK3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFR1Q86XK3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SFR1Q86XK3 AL451085.2-201ENST00000605085 799 ntBASIC25.54■■□□□ 1.68
SFR1Q86XK3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SFR1Q86XK3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.54■■□□□ 1.68
SFR1Q86XK3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SFR1Q86XK3 AC131274.2-201ENST00000580697 1507 ntBASIC25.53■■□□□ 1.68
SFR1Q86XK3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SFR1Q86XK3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.53■■□□□ 1.68
SFR1Q86XK3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SFR1Q86XK3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SFR1Q86XK3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.52■■□□□ 1.68
SFR1Q86XK3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.52■■□□□ 1.68
SFR1Q86XK3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
SFR1Q86XK3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFR1Q86XK3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFR1Q86XK3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SFR1Q86XK3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFR1Q86XK3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SFR1Q86XK3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.68
SFR1Q86XK3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.51■■□□□ 1.67
SFR1Q86XK3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.51■■□□□ 1.67
SFR1Q86XK3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 AC137630.3-201ENST00000607245 391 ntBASIC25.51■■□□□ 1.67
SFR1Q86XK3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SFR1Q86XK3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SFR1Q86XK3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SFR1Q86XK3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.5■■□□□ 1.67
SFR1Q86XK3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SFR1Q86XK3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SFR1Q86XK3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.5■■□□□ 1.67
SFR1Q86XK3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SFR1Q86XK3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SFR1Q86XK3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.49■■□□□ 1.67
SFR1Q86XK3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SFR1Q86XK3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SFR1Q86XK3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SFR1Q86XK3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.48■■□□□ 1.67
SFR1Q86XK3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SFR1Q86XK3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SFR1Q86XK3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 AC009299.2-201ENST00000482477 511 ntBASIC25.48■■□□□ 1.67
SFR1Q86XK3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SFR1Q86XK3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SFR1Q86XK3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.48■■□□□ 1.67
SFR1Q86XK3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SFR1Q86XK3 AL022069.1-201ENST00000568025 1636 ntBASIC25.48■■□□□ 1.67
SFR1Q86XK3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SFR1Q86XK3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.47■■□□□ 1.67
SFR1Q86XK3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SFR1Q86XK3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.47■■□□□ 1.67
SFR1Q86XK3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SFR1Q86XK3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SFR1Q86XK3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.47■■□□□ 1.67
SFR1Q86XK3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.47■■□□□ 1.67
SFR1Q86XK3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms