Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTN4RL1Q86UN2 AC005703.6-201ENST00000623265 1329 ntBASIC25.16■■□□□ 1.62
RTN4RL1Q86UN2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTN4RL1Q86UN2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTN4RL1Q86UN2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTN4RL1Q86UN2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTN4RL1Q86UN2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTN4RL1Q86UN2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTN4RL1Q86UN2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN4RL1Q86UN2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
RTN4RL1Q86UN2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTN4RL1Q86UN2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 EDA-201ENST00000338901 1233 ntBASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 AL355001.2-201ENST00000620617 1191 ntBASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTN4RL1Q86UN2 AL136967.2-201ENST00000623968 743 ntBASIC25.11■■□□□ 1.61
RTN4RL1Q86UN2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTN4RL1Q86UN2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RTN4RL1Q86UN2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 AC026271.2-201ENST00000428091 497 ntBASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 RARRES2P6-201ENST00000567333 442 ntBASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RTN4RL1Q86UN2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RTN4RL1Q86UN2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.08■■□□□ 1.6
RTN4RL1Q86UN2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
RTN4RL1Q86UN2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTN4RL1Q86UN2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTN4RL1Q86UN2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTN4RL1Q86UN2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTN4RL1Q86UN2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTN4RL1Q86UN2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTN4RL1Q86UN2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.07■■□□□ 1.6
RTN4RL1Q86UN2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTN4RL1Q86UN2 DUSP8P4-201ENST00000399538 1761 ntBASIC25.06■■□□□ 1.6
RTN4RL1Q86UN2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.06■■□□□ 1.6
RTN4RL1Q86UN2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTN4RL1Q86UN2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.06■■□□□ 1.6
RTN4RL1Q86UN2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
RTN4RL1Q86UN2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.05■■□□□ 1.6
RTN4RL1Q86UN2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN4RL1Q86UN2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN4RL1Q86UN2 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.05■■□□□ 1.6
RTN4RL1Q86UN2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN4RL1Q86UN2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms