Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTL6Q6ICC9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTL6Q6ICC9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL6Q6ICC9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL6Q6ICC9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTL6Q6ICC9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.83■□□□□ 0.93
RTL6Q6ICC9 SNX5-217ENST00000606557 1087 ntBASIC20.83■□□□□ 0.93
RTL6Q6ICC9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL6Q6ICC9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL6Q6ICC9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RTL6Q6ICC9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.83■□□□□ 0.92
RTL6Q6ICC9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 MIR4466-201ENST00000606121 54 ntBASIC20.82■□□□□ 0.92
RTL6Q6ICC9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL6Q6ICC9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 MIR638-201ENST00000385237 100 ntBASIC20.81■□□□□ 0.92
RTL6Q6ICC9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL6Q6ICC9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL6Q6ICC9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL6Q6ICC9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL6Q6ICC9 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL6Q6ICC9 AL512631.2-201ENST00000604634 923 ntBASIC20.8■□□□□ 0.92
RTL6Q6ICC9 AL139246.5-201ENST00000606645 996 ntBASIC20.8■□□□□ 0.92
RTL6Q6ICC9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RTL6Q6ICC9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL6Q6ICC9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.79■□□□□ 0.92
RTL6Q6ICC9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL6Q6ICC9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL6Q6ICC9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 MIR6722-201ENST00000617286 78 ntBASIC20.77■□□□□ 0.92
RTL6Q6ICC9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTL6Q6ICC9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTL6Q6ICC9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTL6Q6ICC9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL6Q6ICC9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL6Q6ICC9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 AC110285.6-201ENST00000617652 491 ntBASIC20.75■□□□□ 0.91
RTL6Q6ICC9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL6Q6ICC9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.74■□□□□ 0.91
RTL6Q6ICC9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms