Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM78BQ5VT40 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM78BQ5VT40 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 C9orf163-202ENST00000624034 2573 ntBASIC18.2■□□□□ 0.5
FAM78BQ5VT40 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM78BQ5VT40 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM78BQ5VT40 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.18■□□□□ 0.5
FAM78BQ5VT40 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM78BQ5VT40 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM78BQ5VT40 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 HLA-L-211ENST00000482052 1765 ntBASIC18.16■□□□□ 0.5
FAM78BQ5VT40 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM78BQ5VT40 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 AL117328.2-201ENST00000624617 1940 ntBASIC18.15■□□□□ 0.5
FAM78BQ5VT40 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FAM78BQ5VT40 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FAM78BQ5VT40 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
FAM78BQ5VT40 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
FAM78BQ5VT40 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 633.6 ms