Protein–RNA interactions for Protein: Q5T8R8

C9orf66, Uncharacterized protein C9orf66, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf66Q5T8R8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
C9orf66Q5T8R8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.46■□□□□ 0.39
C9orf66Q5T8R8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf66Q5T8R8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
C9orf66Q5T8R8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf66Q5T8R8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
C9orf66Q5T8R8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 PBX2P1-201ENST00000493219 1291 ntBASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf66Q5T8R8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 AC106739.1-201ENST00000617035 715 ntBASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf66Q5T8R8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 DUSP8P4-201ENST00000399538 1761 ntBASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
C9orf66Q5T8R8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 UNC93B3-201ENST00000308076 687 ntBASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 DUX4L19-201ENST00000557448 1267 ntBASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 AC092171.4-201ENST00000609130 632 ntBASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 MIR6089-201ENST00000616698 64 ntBASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C9orf66Q5T8R8 AL022069.1-201ENST00000568025 1636 ntBASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 AL136162.1-201ENST00000607711 1078 ntBASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C9orf66Q5T8R8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 SLC6A10P-202ENST00000431994 2058 ntBASIC17.4■□□□□ 0.38
C9orf66Q5T8R8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C9orf66Q5T8R8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 AC142381.2-201ENST00000566120 298 ntBASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 AC135279.3-201ENST00000610945 1311 ntBASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.39■□□□□ 0.37
C9orf66Q5T8R8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 AC131274.2-201ENST00000580697 1507 ntBASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C9orf66Q5T8R8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C9orf66Q5T8R8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms