Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.71■□□□□ 0.75
UBA52P62987 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBA52P62987 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UBA52P62987 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBA52P62987 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBA52P62987 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
UBA52P62987 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBA52P62987 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBA52P62987 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBA52P62987 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBA52P62987 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
UBA52P62987 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.7■□□□□ 0.74
UBA52P62987 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBA52P62987 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBA52P62987 AL592295.1-201ENST00000400984 884 ntBASIC19.7■□□□□ 0.74
UBA52P62987 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.7■□□□□ 0.74
UBA52P62987 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
UBA52P62987 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBA52P62987 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.7■□□□□ 0.74
UBA52P62987 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBA52P62987 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.7■□□□□ 0.74
UBA52P62987 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.7■□□□□ 0.74
UBA52P62987 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBA52P62987 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBA52P62987 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 MIR4508-201ENST00000584178 70 ntBASIC19.69■□□□□ 0.74
UBA52P62987 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.69■□□□□ 0.74
UBA52P62987 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBA52P62987 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
UBA52P62987 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.68■□□□□ 0.74
UBA52P62987 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.68■□□□□ 0.74
UBA52P62987 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.68■□□□□ 0.74
UBA52P62987 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBA52P62987 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBA52P62987 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBA52P62987 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBA52P62987 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBA52P62987 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBA52P62987 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBA52P62987 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.67■□□□□ 0.74
UBA52P62987 AC131212.1-201ENST00000613771 668 ntBASIC19.67■□□□□ 0.74
UBA52P62987 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.67■□□□□ 0.74
UBA52P62987 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBA52P62987 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBA52P62987 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.66■□□□□ 0.74
UBA52P62987 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 AL117328.2-201ENST00000624617 1940 ntBASIC19.66■□□□□ 0.74
UBA52P62987 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.66■□□□□ 0.74
UBA52P62987 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBA52P62987 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UBA52P62987 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 GUSBP5-201ENST00000418136 578 ntBASIC19.65■□□□□ 0.74
UBA52P62987 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UBA52P62987 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 AP003733.4-201ENST00000623785 1697 ntBASIC19.65■□□□□ 0.74
UBA52P62987 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBA52P62987 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBA52P62987 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
UBA52P62987 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA52P62987 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
UBA52P62987 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
UBA52P62987 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.64■□□□□ 0.73
UBA52P62987 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBA52P62987 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA52P62987 AL359504.2-201ENST00000605506 1601 ntBASIC19.64■□□□□ 0.73
UBA52P62987 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA52P62987 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.63■□□□□ 0.73
UBA52P62987 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA52P62987 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms