Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDC42P60953 CLDN5-201ENST00000403084 2357 ntBASIC21.05■□□□□ 0.96
CDC42P60953 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42P60953 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42P60953 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42P60953 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42P60953 CR559946.2-201ENST00000623684 991 ntBASIC21.05■□□□□ 0.96
CDC42P60953 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42P60953 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC42P60953 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.05■□□□□ 0.96
CDC42P60953 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
CDC42P60953 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDC42P60953 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 ZNRF2P2-203ENST00000454624 420 ntBASIC21.04■□□□□ 0.96
CDC42P60953 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42P60953 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42P60953 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDC42P60953 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42P60953 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 PKD1P6-201ENST00000343738 4769 ntBASIC21.03■□□□□ 0.96
CDC42P60953 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42P60953 SMPD5-203ENST00000639008 1464 ntBASIC21.02■□□□□ 0.96
CDC42P60953 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42P60953 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42P60953 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42P60953 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42P60953 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDC42P60953 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42P60953 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42P60953 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.02■□□□□ 0.95
CDC42P60953 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42P60953 FOXO3B-201ENST00000395675 1928 ntBASIC21.02■□□□□ 0.95
CDC42P60953 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
CDC42P60953 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42P60953 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDC42P60953 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDC42P60953 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42P60953 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDC42P60953 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42P60953 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42P60953 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDC42P60953 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42P60953 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21■□□□□ 0.95
CDC42P60953 AC233723.2-201ENST00000623798 2106 ntBASIC21■□□□□ 0.95
CDC42P60953 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CDC42P60953 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42P60953 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42P60953 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42P60953 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42P60953 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42P60953 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42P60953 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC42P60953 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDC42P60953 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC42P60953 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDC42P60953 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CDC42P60953 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42P60953 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42P60953 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42P60953 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42P60953 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42P60953 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42P60953 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42P60953 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42P60953 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.96■□□□□ 0.95
CDC42P60953 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.96■□□□□ 0.95
CDC42P60953 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42P60953 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.96■□□□□ 0.95
CDC42P60953 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.96■□□□□ 0.95
CDC42P60953 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDC42P60953 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms