Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PER3P56645 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.22■□□□□ 0.99
PER3P56645 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PER3P56645 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PER3P56645 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.22■□□□□ 0.99
PER3P56645 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.22■□□□□ 0.99
PER3P56645 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PER3P56645 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.22■□□□□ 0.99
PER3P56645 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.22■□□□□ 0.99
PER3P56645 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PER3P56645 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PER3P56645 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.22■□□□□ 0.99
PER3P56645 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.22■□□□□ 0.99
PER3P56645 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PER3P56645 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PER3P56645 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PER3P56645 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.21■□□□□ 0.99
PER3P56645 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.21■□□□□ 0.99
PER3P56645 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PER3P56645 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PER3P56645 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PER3P56645 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PER3P56645 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PER3P56645 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.2■□□□□ 0.98
PER3P56645 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.2■□□□□ 0.98
PER3P56645 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.2■□□□□ 0.98
PER3P56645 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.2■□□□□ 0.98
PER3P56645 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PER3P56645 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PER3P56645 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.19■□□□□ 0.98
PER3P56645 AC011551.1-201ENST00000614101 683 ntBASIC21.19■□□□□ 0.98
PER3P56645 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PER3P56645 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PER3P56645 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PER3P56645 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PER3P56645 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.18■□□□□ 0.98
PER3P56645 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.18■□□□□ 0.98
PER3P56645 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.18■□□□□ 0.98
PER3P56645 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
PER3P56645 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PER3P56645 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PER3P56645 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.17■□□□□ 0.98
PER3P56645 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.17■□□□□ 0.98
PER3P56645 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.17■□□□□ 0.98
PER3P56645 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.17■□□□□ 0.98
PER3P56645 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.17■□□□□ 0.98
PER3P56645 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PER3P56645 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PER3P56645 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.16■□□□□ 0.98
PER3P56645 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.16■□□□□ 0.98
PER3P56645 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PER3P56645 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PER3P56645 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PER3P56645 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PER3P56645 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PER3P56645 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PER3P56645 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PER3P56645 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.15■□□□□ 0.98
PER3P56645 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.15■□□□□ 0.98
PER3P56645 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PER3P56645 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PER3P56645 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
PER3P56645 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.14■□□□□ 0.98
PER3P56645 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.14■□□□□ 0.97
PER3P56645 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.14■□□□□ 0.97
PER3P56645 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.14■□□□□ 0.97
PER3P56645 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.14■□□□□ 0.97
PER3P56645 MIR4466-201ENST00000606121 54 ntBASIC21.14■□□□□ 0.97
PER3P56645 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.14■□□□□ 0.97
PER3P56645 AC092666.2-201ENST00000613287 246 ntBASIC21.14■□□□□ 0.97
PER3P56645 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.14■□□□□ 0.97
PER3P56645 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PER3P56645 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PER3P56645 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.14■□□□□ 0.97
PER3P56645 AC012676.1-201ENST00000574705 1949 ntBASIC21.14■□□□□ 0.97
PER3P56645 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PER3P56645 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PER3P56645 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PER3P56645 LINC00543-201ENST00000567234 1845 ntBASIC21.13■□□□□ 0.97
PER3P56645 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.12■□□□□ 0.97
PER3P56645 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PER3P56645 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
PER3P56645 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PER3P56645 AC142381.2-201ENST00000566120 298 ntBASIC21.12■□□□□ 0.97
PER3P56645 RARRES2P6-201ENST00000567333 442 ntBASIC21.12■□□□□ 0.97
PER3P56645 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.12■□□□□ 0.97
PER3P56645 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms