Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
THBS3P49746 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
THBS3P49746 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.96■□□□□ 0.63
THBS3P49746 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
THBS3P49746 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
THBS3P49746 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
THBS3P49746 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
THBS3P49746 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.96■□□□□ 0.63
THBS3P49746 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
THBS3P49746 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
THBS3P49746 HLA-L-211ENST00000482052 1765 ntBASIC18.96■□□□□ 0.63
THBS3P49746 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.96■□□□□ 0.63
THBS3P49746 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
THBS3P49746 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.95■□□□□ 0.62
THBS3P49746 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
THBS3P49746 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THBS3P49746 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THBS3P49746 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.95■□□□□ 0.62
THBS3P49746 DUX4L18-201ENST00000553347 1267 ntBASIC18.95■□□□□ 0.62
THBS3P49746 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.95■□□□□ 0.62
THBS3P49746 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THBS3P49746 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THBS3P49746 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.95■□□□□ 0.62
THBS3P49746 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.95■□□□□ 0.62
THBS3P49746 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THBS3P49746 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
THBS3P49746 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THBS3P49746 MIR6765-201ENST00000614092 87 ntBASIC18.94■□□□□ 0.62
THBS3P49746 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
THBS3P49746 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
THBS3P49746 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.94■□□□□ 0.62
THBS3P49746 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.94■□□□□ 0.62
THBS3P49746 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
THBS3P49746 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.93■□□□□ 0.62
THBS3P49746 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.93■□□□□ 0.62
THBS3P49746 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
THBS3P49746 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.93■□□□□ 0.62
THBS3P49746 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
THBS3P49746 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.93■□□□□ 0.62
THBS3P49746 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.93■□□□□ 0.62
THBS3P49746 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.93■□□□□ 0.62
THBS3P49746 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
THBS3P49746 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS3P49746 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS3P49746 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS3P49746 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS3P49746 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
THBS3P49746 SPCS2P3-201ENST00000500401 656 ntBASIC18.92■□□□□ 0.62
THBS3P49746 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.92■□□□□ 0.62
THBS3P49746 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
THBS3P49746 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
THBS3P49746 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.92■□□□□ 0.62
THBS3P49746 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.91■□□□□ 0.62
THBS3P49746 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.91■□□□□ 0.62
THBS3P49746 AC087393.1-201ENST00000582896 145 ntBASIC18.91■□□□□ 0.62
THBS3P49746 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS3P49746 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 AL592295.1-201ENST00000400984 884 ntBASIC18.9■□□□□ 0.62
THBS3P49746 DUX4L9-201ENST00000449051 1259 ntBASIC18.9■□□□□ 0.62
THBS3P49746 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS3P49746 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
THBS3P49746 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
THBS3P49746 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
THBS3P49746 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS3P49746 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS3P49746 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS3P49746 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS3P49746 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS3P49746 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
THBS3P49746 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS3P49746 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS3P49746 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS3P49746 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS3P49746 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS3P49746 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
THBS3P49746 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.88■□□□□ 0.61
THBS3P49746 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms