Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 FUN19YAL034C 1242 nt3.94□□□□□ -1.78
VPS55P47111 XPT1YJR133W 630 nt3.94□□□□□ -1.78
VPS55P47111 YAL056C-AYAL056C-A 351 nt3.94□□□□□ -1.78
VPS55P47111 SCW10YMR305C 1170 nt3.94□□□□□ -1.78
VPS55P47111 ISU2YOR226C 471 nt3.94□□□□□ -1.78
VPS55P47111 RDL2YOR286W 450 nt3.94□□□□□ -1.78
VPS55P47111 PAP1YKR002W 1707 nt3.94□□□□□ -1.78
VPS55P47111 SIF2YBR103W 1608 nt3.94□□□□□ -1.78
VPS55P47111 CLF1YLR117C 2064 nt3.94□□□□□ -1.78
VPS55P47111 ZUO1YGR285C 1302 nt3.94□□□□□ -1.78
VPS55P47111 MF(ALPHA)2YGL089C 363 nt3.93□□□□□ -1.78
VPS55P47111 BGL2YGR282C 942 nt3.93□□□□□ -1.78
VPS55P47111 NSG1YHR133C 876 nt3.93□□□□□ -1.78
VPS55P47111 KTI12YKL110C 942 nt3.93□□□□□ -1.78
VPS55P47111 APN1YKL114C 1104 nt3.93□□□□□ -1.78
VPS55P47111 JEM1YJL073W 1938 nt3.93□□□□□ -1.78
VPS55P47111 PRR1YKL116C 1557 nt3.93□□□□□ -1.78
VPS55P47111 CAF4YKR036C 1932 nt3.92□□□□□ -1.78
VPS55P47111 RRP45YDR280W 918 nt3.92□□□□□ -1.78
VPS55P47111 HLJ1YMR161W 675 nt3.92□□□□□ -1.78
VPS55P47111 RPL3YOR063W 1164 nt3.92□□□□□ -1.78
VPS55P47111 TUP1YCR084C 2142 nt3.92□□□□□ -1.78
VPS55P47111 MCH4YOL119C 1506 nt3.91□□□□□ -1.78
VPS55P47111 LUC7YDL087C 786 nt3.91□□□□□ -1.78
VPS55P47111 SHO1YER118C 1104 nt3.91□□□□□ -1.78
VPS55P47111 ZRT1YGL255W 1131 nt3.91□□□□□ -1.78
VPS55P47111 CDC11YJR076C 1248 nt3.91□□□□□ -1.78
VPS55P47111 MRPL4YLR439W 960 nt3.91□□□□□ -1.78
VPS55P47111 SFT2YBL102W 648 nt3.91□□□□□ -1.78
VPS55P47111 DCI1YOR180C 816 nt3.91□□□□□ -1.78
VPS55P47111 PCA1YBR295W 3651 nt3.91□□□□□ -1.78
VPS55P47111 CCZ1YBR131W 2115 nt3.91□□□□□ -1.78
VPS55P47111 CTS1YLR286C 1689 nt3.9□□□□□ -1.78
VPS55P47111 STE7YDL159W 1548 nt3.9□□□□□ -1.78
VPS55P47111 FUI1YBL042C 1920 nt3.9□□□□□ -1.78
VPS55P47111 YNL108CYNL108C 813 nt3.9□□□□□ -1.79
VPS55P47111 YNL296WYNL296W 315 nt3.9□□□□□ -1.79
VPS55P47111 ETT1YOR051C 1239 nt3.9□□□□□ -1.79
VPS55P47111 FAU1YER183C 636 nt3.89□□□□□ -1.79
VPS55P47111 ARO2YGL148W 1131 nt3.89□□□□□ -1.79
VPS55P47111 VPS29YHR012W 849 nt3.89□□□□□ -1.79
VPS55P47111 YHR212W-AYHR212W-A 204 nt3.89□□□□□ -1.79
VPS55P47111 tX(XXX)DtX(XXX)D 100 nt3.89□□□□□ -1.79
VPS55P47111 YAR061WYAR061W 204 nt3.89□□□□□ -1.79
VPS55P47111 MRI1YPR118W 1236 nt3.89□□□□□ -1.79
VPS55P47111 YBR126W-AYBR126W-A 207 nt3.89□□□□□ -1.79
VPS55P47111 GUF1YLR289W 1938 nt3.89□□□□□ -1.79
VPS55P47111 CUE2YKL090W 1332 nt3.89□□□□□ -1.79
VPS55P47111 CHL4YDR254W 1377 nt3.89□□□□□ -1.79
VPS55P47111 YFL052WYFL052W 1398 nt3.89□□□□□ -1.79
VPS55P47111 ARB1YER036C 1833 nt3.88□□□□□ -1.79
VPS55P47111 VHC1YBR235W 3363 nt3.88□□□□□ -1.79
VPS55P47111 SOH1YGL127C 384 nt3.88□□□□□ -1.79
VPS55P47111 CAX4YGR036C 720 nt3.88□□□□□ -1.79
VPS55P47111 GTO1YGR154C 1071 nt3.88□□□□□ -1.79
VPS55P47111 YAL044W-AYAL044W-A 333 nt3.88□□□□□ -1.79
VPS55P47111 PEX22YAL055W 543 nt3.88□□□□□ -1.79
VPS55P47111 CTR3YLR411W 726 nt3.88□□□□□ -1.79
VPS55P47111 YNR042WYNR042W 429 nt3.88□□□□□ -1.79
VPS55P47111 OST3YOR085W 1053 nt3.88□□□□□ -1.79
VPS55P47111 DRN1YGR093W 1524 nt3.88□□□□□ -1.79
VPS55P47111 SER33YIL074C 1410 nt3.87□□□□□ -1.79
VPS55P47111 DRS1YLL008W 2259 nt3.87□□□□□ -1.79
VPS55P47111 JAC1YGL018C 555 nt3.87□□□□□ -1.79
VPS55P47111 NPY1YGL067W 1155 nt3.87□□□□□ -1.79
VPS55P47111 YMR010WYMR010W 1218 nt3.87□□□□□ -1.79
VPS55P47111 TRM10YOL093W 882 nt3.87□□□□□ -1.79
VPS55P47111 YBR226CYBR226C 411 nt3.87□□□□□ -1.79
VPS55P47111 NOP2YNL061W 1857 nt3.87□□□□□ -1.79
VPS55P47111 TFC7YOR110W 1308 nt3.87□□□□□ -1.79
VPS55P47111 COT1YOR316C 1320 nt3.87□□□□□ -1.79
VPS55P47111 ADE3YGR204W 2841 nt3.87□□□□□ -1.79
VPS55P47111 PAN1YIR006C 4443 nt3.87□□□□□ -1.79
VPS55P47111 UGA1YGR019W 1416 nt3.87□□□□□ -1.79
VPS55P47111 CIT3YPR001W 1461 nt3.86□□□□□ -1.79
VPS55P47111 SED4YCR067C 3198 nt3.86□□□□□ -1.79
VPS55P47111 NUP116YMR047C 3342 nt3.86□□□□□ -1.79
VPS55P47111 CAB4YGR277C 918 nt3.86□□□□□ -1.79
VPS55P47111 CUE5YOR042W 1236 nt3.86□□□□□ -1.79
VPS55P47111 CDC21YOR074C 915 nt3.86□□□□□ -1.79
VPS55P47111 HXT4YHR092C 1731 nt3.86□□□□□ -1.79
VPS55P47111 SPS22YCL048W 1392 nt3.86□□□□□ -1.79
VPS55P47111 NOP8YOL144W 1455 nt3.86□□□□□ -1.79
VPS55P47111 BLM10YFL007W 6432 nt3.85□□□□□ -1.79
VPS55P47111 SCM3YDL139C 672 nt3.85□□□□□ -1.79
VPS55P47111 THI5YFL058W 1023 nt3.85□□□□□ -1.79
VPS55P47111 THI12YNL332W 1023 nt3.85□□□□□ -1.79
VPS55P47111 ASA1YPR085C 1332 nt3.85□□□□□ -1.79
VPS55P47111 CMR1YDL156W 1569 nt3.85□□□□□ -1.79
VPS55P47111 YJL206CYJL206C 2277 nt3.84□□□□□ -1.79
VPS55P47111 YNG2YHR090C 849 nt3.84□□□□□ -1.79
VPS55P47111 UGA2YBR006W 1494 nt3.84□□□□□ -1.8
VPS55P47111 BRE2YLR015W 1518 nt3.84□□□□□ -1.8
VPS55P47111 CPS1YJL172W 1731 nt3.84□□□□□ -1.8
VPS55P47111 RRP46YGR095C 672 nt3.83□□□□□ -1.8
VPS55P47111 MRP21YBL090W 534 nt3.83□□□□□ -1.8
VPS55P47111 FEX1YOR390W 1128 nt3.83□□□□□ -1.8
VPS55P47111 FEX2YPL279C 1128 nt3.83□□□□□ -1.8
VPS55P47111 MLF3YNL074C 1359 nt3.83□□□□□ -1.8
VPS55P47111 WTM2YOR229W 1404 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms