Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 RPA49YNL248C 1248 nt6.01□□□□□ -1.45
RPN11P43588 YPR071WYPR071W 636 nt6.01□□□□□ -1.45
RPN11P43588 IMA5YJL216C 1746 nt6.01□□□□□ -1.45
RPN11P43588 UGA2YBR006W 1494 nt6.01□□□□□ -1.45
RPN11P43588 BUD16YEL029C 939 nt6□□□□□ -1.45
RPN11P43588 SUT1YGL162W 900 nt6□□□□□ -1.45
RPN11P43588 AST1YBL069W 1290 nt6□□□□□ -1.45
RPN11P43588 AVT4YNL101W 2142 nt6□□□□□ -1.45
RPN11P43588 GSP2YOR185C 663 nt6□□□□□ -1.45
RPN11P43588 CDS1YBR029C 1374 nt6□□□□□ -1.45
RPN11P43588 OPT1YJL212C 2400 nt6□□□□□ -1.45
RPN11P43588 HFI1YPL254W 1467 nt6□□□□□ -1.45
RPN11P43588 ATR1YML116W 1629 nt5.99□□□□□ -1.45
RPN11P43588 CDC10YCR002C 969 nt5.99□□□□□ -1.45
RPN11P43588 CDC43YGL155W 1131 nt5.99□□□□□ -1.45
RPN11P43588 FZF1YGL254W 900 nt5.99□□□□□ -1.45
RPN11P43588 ECM30YLR436C 3825 nt5.99□□□□□ -1.45
RPN11P43588 SCW10YMR305C 1170 nt5.99□□□□□ -1.45
RPN11P43588 YOL019W-AYOL019W-A 153 nt5.99□□□□□ -1.45
RPN11P43588 TRM10YOL093W 882 nt5.99□□□□□ -1.45
RPN11P43588 YPL278CYPL278C 303 nt5.99□□□□□ -1.45
RPN11P43588 MAG2YLR427W 2013 nt5.99□□□□□ -1.45
RPN11P43588 DAL4YIR028W 1908 nt5.99□□□□□ -1.45
RPN11P43588 SSH4YKL124W 1740 nt5.99□□□□□ -1.45
RPN11P43588 CLB1YGR108W 1416 nt5.99□□□□□ -1.45
RPN11P43588 VTS1YOR359W 1572 nt5.98□□□□□ -1.45
RPN11P43588 AIM3YBR108W 2844 nt5.98□□□□□ -1.45
RPN11P43588 TAF11YML015C 1041 nt5.98□□□□□ -1.45
RPN11P43588 YNG1YOR064C 660 nt5.98□□□□□ -1.45
RPN11P43588 CNM67YNL225C 1746 nt5.98□□□□□ -1.45
RPN11P43588 DPH6YLR143W 2058 nt5.98□□□□□ -1.45
RPN11P43588 KNS1YLL019C 2214 nt5.97□□□□□ -1.45
RPN11P43588 TOS2YGR221C 1869 nt5.97□□□□□ -1.45
RPN11P43588 MRS3YJL133W 945 nt5.97□□□□□ -1.45
RPN11P43588 MDG1YNL173C 1101 nt5.97□□□□□ -1.45
RPN11P43588 STE50YCL032W 1041 nt5.97□□□□□ -1.45
RPN11P43588 NOP58YOR310C 1536 nt5.97□□□□□ -1.45
RPN11P43588 ACO1YLR304C 2337 nt5.97□□□□□ -1.45
RPN11P43588 VPS5YOR069W 2028 nt5.96□□□□□ -1.45
RPN11P43588 HAS1YMR290C 1518 nt5.96□□□□□ -1.46
RPN11P43588 RRN9YMR270C 1098 nt5.96□□□□□ -1.46
RPN11P43588 PGA2YNL149C 390 nt5.96□□□□□ -1.46
RPN11P43588 PFA3YNL326C 1011 nt5.96□□□□□ -1.46
RPN11P43588 RPL19AYBR084C-A 570 nt5.96□□□□□ -1.46
RPN11P43588 PUT1YLR142W 1431 nt5.96□□□□□ -1.46
RPN11P43588 GRS1YBR121C 2004 nt5.96□□□□□ -1.46
RPN11P43588 MAL13YGR288W 1422 nt5.95□□□□□ -1.46
RPN11P43588 PRR1YKL116C 1557 nt5.95□□□□□ -1.46
RPN11P43588 YIL092WYIL092W 1902 nt5.95□□□□□ -1.46
RPN11P43588 CAF4YKR036C 1932 nt5.95□□□□□ -1.46
RPN11P43588 YDR514CYDR514C 1452 nt5.95□□□□□ -1.46
RPN11P43588 MMT2YPL224C 1455 nt5.95□□□□□ -1.46
RPN11P43588 FUM1YPL262W 1467 nt5.95□□□□□ -1.46
RPN11P43588 PDR10YOR328W 4695 nt5.95□□□□□ -1.46
RPN11P43588 BPL1YDL141W 2073 nt5.94□□□□□ -1.46
RPN11P43588 ARO10YDR380W 1908 nt5.94□□□□□ -1.46
RPN11P43588 SMF3YLR034C 1422 nt5.94□□□□□ -1.46
RPN11P43588 RXT3YDL076C 885 nt5.94□□□□□ -1.46
RPN11P43588 HMS2YJR147W 1077 nt5.94□□□□□ -1.46
RPN11P43588 DSC2YOL073C 969 nt5.94□□□□□ -1.46
RPN11P43588 ICY2YPL250C 411 nt5.94□□□□□ -1.46
RPN11P43588 YPR150WYPR150W 522 nt5.94□□□□□ -1.46
RPN11P43588 NHP6BYBR089C-A 300 nt5.94□□□□□ -1.46
RPN11P43588 RRT2YBR246W 1164 nt5.94□□□□□ -1.46
RPN11P43588 MSS116YDR194C 1995 nt5.94□□□□□ -1.46
RPN11P43588 LAG2YOL025W 1983 nt5.94□□□□□ -1.46
RPN11P43588 LYP1YNL268W 1836 nt5.94□□□□□ -1.46
RPN11P43588 FOX2YKR009C 2703 nt5.94□□□□□ -1.46
RPN11P43588 PAP1YKR002W 1707 nt5.94□□□□□ -1.46
RPN11P43588 FUI1YBL042C 1920 nt5.93□□□□□ -1.46
RPN11P43588 PRP40YKL012W 1752 nt5.93□□□□□ -1.46
RPN11P43588 YMR027WYMR027W 1413 nt5.93□□□□□ -1.46
RPN11P43588 MPH2YDL247W 1830 nt5.93□□□□□ -1.46
RPN11P43588 ARF2YDL137W 546 nt5.93□□□□□ -1.46
RPN11P43588 CHO1YER026C 831 nt5.93□□□□□ -1.46
RPN11P43588 YML101C-AYML101C-A 318 nt5.93□□□□□ -1.46
RPN11P43588 SAP30YMR263W 606 nt5.93□□□□□ -1.46
RPN11P43588 YGP1YNL160W 1065 nt5.93□□□□□ -1.46
RPN11P43588 CWC25YNL245C 540 nt5.93□□□□□ -1.46
RPN11P43588 YOR024WYOR024W 324 nt5.93□□□□□ -1.46
RPN11P43588 UMP1YBR173C 447 nt5.93□□□□□ -1.46
RPN11P43588 ZUO1YGR285C 1302 nt5.93□□□□□ -1.46
RPN11P43588 ABF1YKL112W 2196 nt5.93□□□□□ -1.46
RPN11P43588 KRE28YDR532C 1158 nt5.92□□□□□ -1.46
RPN11P43588 RFC2YJR068W 1062 nt5.92□□□□□ -1.46
RPN11P43588 YML6YML025C 861 nt5.92□□□□□ -1.46
RPN11P43588 CIN5YOR028C 888 nt5.92□□□□□ -1.46
RPN11P43588 YPL071CYPL071C 471 nt5.92□□□□□ -1.46
RPN11P43588 MPA43YNL249C 1629 nt5.92□□□□□ -1.46
RPN11P43588 SGE1YPR198W 1632 nt5.92□□□□□ -1.46
RPN11P43588 STB5YHR178W 2232 nt5.91□□□□□ -1.46
RPN11P43588 BSC5YNR069C 1470 nt5.91□□□□□ -1.46
RPN11P43588 LUC7YDL087C 786 nt5.91□□□□□ -1.46
RPN11P43588 DPB4YDR121W 591 nt5.91□□□□□ -1.46
RPN11P43588 GLO2YDR272W 825 nt5.91□□□□□ -1.46
RPN11P43588 THI5YFL058W 1023 nt5.91□□□□□ -1.46
RPN11P43588 THI12YNL332W 1023 nt5.91□□□□□ -1.46
RPN11P43588 YPR098CYPR098C 486 nt5.91□□□□□ -1.46
RPN11P43588 YFR006WYFR006W 1608 nt5.91□□□□□ -1.46
RPN11P43588 PRO2YOR323C 1371 nt5.91□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 52.6 ms