Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HLA-DOBP13765 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DOBP13765 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOBP13765 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOBP13765 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOBP13765 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DOBP13765 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DOBP13765 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DOBP13765 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DOBP13765 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
HLA-DOBP13765 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOBP13765 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.7■□□□□ 0.9
HLA-DOBP13765 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-DOBP13765 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOBP13765 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOBP13765 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOBP13765 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOBP13765 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DOBP13765 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOBP13765 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HLA-DOBP13765 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
HLA-DOBP13765 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.69■□□□□ 0.9
HLA-DOBP13765 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DOBP13765 MIR4508-201ENST00000584178 70 ntBASIC20.69■□□□□ 0.9
HLA-DOBP13765 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DOBP13765 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HLA-DOBP13765 ABCB10P4-201ENST00000566803 2184 ntBASIC20.69■□□□□ 0.9
HLA-DOBP13765 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DOBP13765 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DOBP13765 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DOBP13765 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DOBP13765 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DOBP13765 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.68■□□□□ 0.9
HLA-DOBP13765 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DOBP13765 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DOBP13765 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DOBP13765 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DOBP13765 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DOBP13765 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DOBP13765 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DOBP13765 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.67■□□□□ 0.9
HLA-DOBP13765 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DOBP13765 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DOBP13765 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.67■□□□□ 0.9
HLA-DOBP13765 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DOBP13765 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DOBP13765 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DOBP13765 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DOBP13765 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DOBP13765 KRT18P24-201ENST00000344739 1156 ntBASIC20.66■□□□□ 0.9
HLA-DOBP13765 THA1P-201ENST00000590384 1145 ntBASIC20.66■□□□□ 0.9
HLA-DOBP13765 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DOBP13765 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DOBP13765 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DOBP13765 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DOBP13765 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DOBP13765 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DOBP13765 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DOBP13765 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.65■□□□□ 0.9
HLA-DOBP13765 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DOBP13765 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DOBP13765 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DOBP13765 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DOBP13765 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DOBP13765 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DOBP13765 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DOBP13765 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DOBP13765 AC103724.3-201ENST00000564481 992 ntBASIC20.64■□□□□ 0.89
HLA-DOBP13765 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DOBP13765 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DOBP13765 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DOBP13765 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HLA-DOBP13765 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DOBP13765 YBX1P4-201ENST00000392794 808 ntBASIC20.63■□□□□ 0.89
HLA-DOBP13765 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DOBP13765 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DOBP13765 MIR4281-201ENST00000580852 62 ntBASIC20.63■□□□□ 0.89
HLA-DOBP13765 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DOBP13765 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DOBP13765 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HLA-DOBP13765 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.62■□□□□ 0.89
HLA-DOBP13765 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HLA-DOBP13765 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DOBP13765 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DOBP13765 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DOBP13765 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DOBP13765 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DOBP13765 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DOBP13765 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DOBP13765 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DOBP13765 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DOBP13765 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DOBP13765 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DOBP13765 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms