Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM17P0DL12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.07■□□□□ 0.32
SMIM17P0DL12 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM17P0DL12 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMIM17P0DL12 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.06■□□□□ 0.32
SMIM17P0DL12 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM17P0DL12 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM17P0DL12 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM17P0DL12 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM17P0DL12 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM17P0DL12 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM17P0DL12 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM17P0DL12 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM17P0DL12 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.04■□□□□ 0.32
SMIM17P0DL12 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.04■□□□□ 0.32
SMIM17P0DL12 DUSP8P5-201ENST00000422884 1815 ntBASIC17.04■□□□□ 0.32
SMIM17P0DL12 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM17P0DL12 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMIM17P0DL12 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM17P0DL12 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMIM17P0DL12 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.03■□□□□ 0.32
SMIM17P0DL12 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMIM17P0DL12 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.03■□□□□ 0.32
SMIM17P0DL12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM17P0DL12 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM17P0DL12 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM17P0DL12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM17P0DL12 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
SMIM17P0DL12 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SMIM17P0DL12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM17P0DL12 RPS2P35-201ENST00000443417 897 ntBASIC17.02■□□□□ 0.32
SMIM17P0DL12 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM17P0DL12 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM17P0DL12 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SMIM17P0DL12 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM17P0DL12 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 ZNRF2P2-203ENST00000454624 420 ntBASIC17.01■□□□□ 0.31
SMIM17P0DL12 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SMIM17P0DL12 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM17P0DL12 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17■□□□□ 0.31
SMIM17P0DL12 AL121603.2-201ENST00000557373 2117 ntBASIC17■□□□□ 0.31
SMIM17P0DL12 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM17P0DL12 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17■□□□□ 0.31
SMIM17P0DL12 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM17P0DL12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM17P0DL12 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17■□□□□ 0.31
SMIM17P0DL12 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM17P0DL12 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SMIM17P0DL12 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM17P0DL12 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM17P0DL12 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM17P0DL12 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SMIM17P0DL12 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMIM17P0DL12 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMIM17P0DL12 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM17P0DL12 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.99■□□□□ 0.31
SMIM17P0DL12 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms