Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ZNF728P0DKX0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 DUSP8P5-201ENST00000422884 1815 ntBASIC19.56■□□□□ 0.72
ZNF728P0DKX0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF728P0DKX0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 AC139795.1-202ENST00000500444 432 ntBASIC19.55■□□□□ 0.72
ZNF728P0DKX0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF728P0DKX0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF728P0DKX0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF728P0DKX0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.54■□□□□ 0.72
ZNF728P0DKX0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ZNF728P0DKX0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF728P0DKX0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF728P0DKX0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 AC004812.2-201ENST00000611079 2094 ntBASIC19.53■□□□□ 0.72
ZNF728P0DKX0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 AL033527.3-201ENST00000566366 1196 ntBASIC19.53■□□□□ 0.72
ZNF728P0DKX0 BHLHE23-202ENST00000612929 1109 ntBASIC19.53■□□□□ 0.72
ZNF728P0DKX0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF728P0DKX0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF728P0DKX0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
ZNF728P0DKX0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF728P0DKX0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.52■□□□□ 0.71
ZNF728P0DKX0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF728P0DKX0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF728P0DKX0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 MIR6089-201ENST00000616698 64 ntBASIC19.5■□□□□ 0.71
ZNF728P0DKX0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
ZNF728P0DKX0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 AC074183.2-201ENST00000623112 922 ntBASIC19.49■□□□□ 0.71
ZNF728P0DKX0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF728P0DKX0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms