Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.18■□□□□ 0.82
UBCP0CG48 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBCP0CG48 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.18■□□□□ 0.82
UBCP0CG48 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBCP0CG48 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBCP0CG48 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBCP0CG48 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBCP0CG48 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.18■□□□□ 0.82
UBCP0CG48 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.17■□□□□ 0.82
UBCP0CG48 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.17■□□□□ 0.82
UBCP0CG48 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.17■□□□□ 0.82
UBCP0CG48 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
UBCP0CG48 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBCP0CG48 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
UBCP0CG48 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
UBCP0CG48 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 RPS2P7-201ENST00000447334 885 ntBASIC20.16■□□□□ 0.82
UBCP0CG48 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.16■□□□□ 0.82
UBCP0CG48 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.16■□□□□ 0.82
UBCP0CG48 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBCP0CG48 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.15■□□□□ 0.82
UBCP0CG48 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBCP0CG48 AC018755.3-202ENST00000596210 929 ntBASIC20.15■□□□□ 0.82
UBCP0CG48 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
UBCP0CG48 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.15■□□□□ 0.82
UBCP0CG48 RNF126P1-201ENST00000567452 1320 ntBASIC20.15■□□□□ 0.82
UBCP0CG48 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.15■□□□□ 0.82
UBCP0CG48 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.15■□□□□ 0.82
UBCP0CG48 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.15■□□□□ 0.82
UBCP0CG48 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBCP0CG48 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
UBCP0CG48 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBCP0CG48 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UBCP0CG48 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBCP0CG48 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBCP0CG48 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.14■□□□□ 0.81
UBCP0CG48 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBCP0CG48 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.14■□□□□ 0.81
UBCP0CG48 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBCP0CG48 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBCP0CG48 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBCP0CG48 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBCP0CG48 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBCP0CG48 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.13■□□□□ 0.81
UBCP0CG48 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
UBCP0CG48 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBCP0CG48 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
UBCP0CG48 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.12■□□□□ 0.81
UBCP0CG48 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UBCP0CG48 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UBCP0CG48 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.12■□□□□ 0.81
UBCP0CG48 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
UBCP0CG48 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.12■□□□□ 0.81
UBCP0CG48 AC090877.2-201ENST00000558441 1738 ntBASIC20.12■□□□□ 0.81
UBCP0CG48 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBCP0CG48 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.11■□□□□ 0.81
UBCP0CG48 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBCP0CG48 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.11■□□□□ 0.81
UBCP0CG48 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.11■□□□□ 0.81
UBCP0CG48 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UBCP0CG48 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
UBCP0CG48 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.11■□□□□ 0.81
UBCP0CG48 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.11■□□□□ 0.81
UBCP0CG48 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBCP0CG48 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBCP0CG48 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.1■□□□□ 0.81
UBCP0CG48 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBCP0CG48 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.1■□□□□ 0.81
UBCP0CG48 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.1■□□□□ 0.81
UBCP0CG48 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBCP0CG48 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBCP0CG48 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBCP0CG48 AL161729.1-201ENST00000604104 1402 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms