Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NEFMP07197 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NEFMP07197 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NEFMP07197 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
NEFMP07197 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.73■■■□□ 2.51
NEFMP07197 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.73■■■□□ 2.51
NEFMP07197 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.73■■■□□ 2.51
NEFMP07197 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
NEFMP07197 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.73■■■□□ 2.51
NEFMP07197 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NEFMP07197 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEFMP07197 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEFMP07197 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEFMP07197 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEFMP07197 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NEFMP07197 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NEFMP07197 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.71■■■□□ 2.51
NEFMP07197 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.71■■■□□ 2.51
NEFMP07197 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.71■■■□□ 2.51
NEFMP07197 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.71■■■□□ 2.51
NEFMP07197 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
NEFMP07197 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.71■■■□□ 2.51
NEFMP07197 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.71■■■□□ 2.51
NEFMP07197 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NEFMP07197 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.71■■■□□ 2.51
NEFMP07197 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.71■■■□□ 2.51
NEFMP07197 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NEFMP07197 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
NEFMP07197 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NEFMP07197 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
NEFMP07197 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
NEFMP07197 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
NEFMP07197 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
NEFMP07197 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NEFMP07197 KRT16P3-201ENST00000439127 1283 ntBASIC30.69■■■□□ 2.5
NEFMP07197 AL356441.2-201ENST00000443009 864 ntBASIC30.69■■■□□ 2.5
NEFMP07197 UNC93B8-201ENST00000511903 705 ntBASIC30.69■■■□□ 2.5
NEFMP07197 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.69■■■□□ 2.5
NEFMP07197 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.69■■■□□ 2.5
NEFMP07197 MTDHP2-201ENST00000601468 714 ntBASIC30.69■■■□□ 2.5
NEFMP07197 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.69■■■□□ 2.5
NEFMP07197 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
NEFMP07197 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.69■■■□□ 2.5
NEFMP07197 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
NEFMP07197 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NEFMP07197 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.68■■■□□ 2.5
NEFMP07197 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
NEFMP07197 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.68■■■□□ 2.5
NEFMP07197 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
NEFMP07197 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
NEFMP07197 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
NEFMP07197 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.67■■■□□ 2.5
NEFMP07197 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEFMP07197 AP003733.4-201ENST00000623785 1697 ntBASIC30.66■■■□□ 2.5
NEFMP07197 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.66■■■□□ 2.5
NEFMP07197 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NEFMP07197 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.66■■■□□ 2.5
NEFMP07197 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NEFMP07197 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NEFMP07197 AC020928.2-201ENST00000588717 2197 ntBASIC30.65■■■□□ 2.5
NEFMP07197 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.65■■■□□ 2.5
NEFMP07197 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.65■■■□□ 2.5
NEFMP07197 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NEFMP07197 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NEFMP07197 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEFMP07197 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEFMP07197 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEFMP07197 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.64■■■□□ 2.5
NEFMP07197 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEFMP07197 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.64■■■□□ 2.5
NEFMP07197 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.64■■■□□ 2.5
NEFMP07197 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.64■■■□□ 2.5
NEFMP07197 AC010997.5-201ENST00000609182 354 ntBASIC30.64■■■□□ 2.5
NEFMP07197 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEFMP07197 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEFMP07197 AC093323.1-202ENST00000635031 2045 ntBASIC30.64■■■□□ 2.5
NEFMP07197 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.63■■■□□ 2.49
NEFMP07197 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NEFMP07197 AC142381.3-201ENST00000568208 1670 ntBASIC30.63■■■□□ 2.49
NEFMP07197 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.63■■■□□ 2.49
NEFMP07197 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
NEFMP07197 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.62■■■□□ 2.49
NEFMP07197 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.62■■■□□ 2.49
NEFMP07197 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NEFMP07197 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NEFMP07197 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.61■■■□□ 2.49
NEFMP07197 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.61■■■□□ 2.49
NEFMP07197 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NEFMP07197 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NEFMP07197 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
NEFMP07197 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NEFMP07197 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NEFMP07197 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NEFMP07197 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms