Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN1P05114 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGN1P05114 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGN1P05114 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGN1P05114 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGN1P05114 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGN1P05114 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGN1P05114 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGN1P05114 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGN1P05114 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGN1P05114 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMGN1P05114 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGN1P05114 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGN1P05114 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGN1P05114 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGN1P05114 AC079834.2-201ENST00000609776 1949 ntBASIC20.83■□□□□ 0.93
HMGN1P05114 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGN1P05114 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGN1P05114 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.83■□□□□ 0.93
HMGN1P05114 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGN1P05114 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGN1P05114 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGN1P05114 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.83■□□□□ 0.92
HMGN1P05114 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HMGN1P05114 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGN1P05114 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGN1P05114 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGN1P05114 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGN1P05114 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGN1P05114 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HMGN1P05114 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGN1P05114 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGN1P05114 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGN1P05114 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGN1P05114 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HMGN1P05114 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGN1P05114 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.81■□□□□ 0.92
HMGN1P05114 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGN1P05114 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGN1P05114 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGN1P05114 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGN1P05114 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGN1P05114 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGN1P05114 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGN1P05114 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGN1P05114 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.8■□□□□ 0.92
HMGN1P05114 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGN1P05114 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGN1P05114 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGN1P05114 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGN1P05114 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.79■□□□□ 0.92
HMGN1P05114 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGN1P05114 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGN1P05114 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGN1P05114 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.79■□□□□ 0.92
HMGN1P05114 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.79■□□□□ 0.92
HMGN1P05114 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HMGN1P05114 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGN1P05114 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGN1P05114 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGN1P05114 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGN1P05114 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HMGN1P05114 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGN1P05114 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGN1P05114 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGN1P05114 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGN1P05114 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
HMGN1P05114 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGN1P05114 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGN1P05114 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGN1P05114 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
HMGN1P05114 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGN1P05114 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGN1P05114 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HMGN1P05114 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGN1P05114 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
HMGN1P05114 AL161729.1-201ENST00000604104 1402 ntBASIC20.77■□□□□ 0.91
HMGN1P05114 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGN1P05114 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGN1P05114 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGN1P05114 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGN1P05114 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGN1P05114 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGN1P05114 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HMGN1P05114 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGN1P05114 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HMGN1P05114 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGN1P05114 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGN1P05114 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGN1P05114 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGN1P05114 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.76■□□□□ 0.91
HMGN1P05114 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGN1P05114 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms