Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RAF1P04049 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAF1P04049 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.82■□□□□ 0.92
RAF1P04049 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAF1P04049 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAF1P04049 LINC01124-201ENST00000409786 2117 ntBASIC20.81■□□□□ 0.92
RAF1P04049 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAF1P04049 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAF1P04049 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAF1P04049 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAF1P04049 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAF1P04049 RPS2P7-201ENST00000447334 885 ntBASIC20.81■□□□□ 0.92
RAF1P04049 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.81■□□□□ 0.92
RAF1P04049 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.81■□□□□ 0.92
RAF1P04049 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAF1P04049 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.81■□□□□ 0.92
RAF1P04049 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAF1P04049 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAF1P04049 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RAF1P04049 LONRF2P2-201ENST00000439212 571 ntBASIC20.8■□□□□ 0.92
RAF1P04049 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.8■□□□□ 0.92
RAF1P04049 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAF1P04049 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAF1P04049 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAF1P04049 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RAF1P04049 BX664725.1-201ENST00000438252 379 ntBASIC20.79■□□□□ 0.92
RAF1P04049 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.79■□□□□ 0.92
RAF1P04049 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAF1P04049 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAF1P04049 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAF1P04049 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RAF1P04049 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAF1P04049 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAF1P04049 AC068473.5-201ENST00000616428 2072 ntBASIC20.78■□□□□ 0.92
RAF1P04049 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAF1P04049 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAF1P04049 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
RAF1P04049 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAF1P04049 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAF1P04049 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAF1P04049 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RAF1P04049 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAF1P04049 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAF1P04049 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAF1P04049 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
RAF1P04049 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAF1P04049 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAF1P04049 SLC6A10P-202ENST00000431994 2058 ntBASIC20.76■□□□□ 0.91
RAF1P04049 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAF1P04049 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.76■□□□□ 0.91
RAF1P04049 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.76■□□□□ 0.91
RAF1P04049 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.76■□□□□ 0.91
RAF1P04049 MIR4787-201ENST00000607364 84 ntBASIC20.76■□□□□ 0.91
RAF1P04049 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAF1P04049 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
RAF1P04049 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.76■□□□□ 0.91
RAF1P04049 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAF1P04049 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RAF1P04049 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.75■□□□□ 0.91
RAF1P04049 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAF1P04049 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAF1P04049 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAF1P04049 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAF1P04049 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAF1P04049 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAF1P04049 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.74■□□□□ 0.91
RAF1P04049 AC141586.4-201ENST00000624558 1573 ntBASIC20.74■□□□□ 0.91
RAF1P04049 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAF1P04049 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RAF1P04049 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAF1P04049 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAF1P04049 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAF1P04049 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAF1P04049 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAF1P04049 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.73■□□□□ 0.91
RAF1P04049 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAF1P04049 KRT16P3-201ENST00000439127 1283 ntBASIC20.73■□□□□ 0.91
RAF1P04049 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.73■□□□□ 0.91
RAF1P04049 AC022616.5-201ENST00000518796 181 ntBASIC20.73■□□□□ 0.91
RAF1P04049 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAF1P04049 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAF1P04049 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAF1P04049 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAF1P04049 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAF1P04049 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAF1P04049 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.72■□□□□ 0.91
RAF1P04049 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAF1P04049 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAF1P04049 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RAF1P04049 KRT18P10-201ENST00000388836 1287 ntBASIC20.71■□□□□ 0.91
RAF1P04049 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.71■□□□□ 0.91
RAF1P04049 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.71■□□□□ 0.91
RAF1P04049 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.71■□□□□ 0.91
RAF1P04049 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms