Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN1O95832 MIR4767-201ENST00000582827 78 ntBASIC20.6■□□□□ 0.89
CLDN1O95832 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CLDN1O95832 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CLDN1O95832 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN1O95832 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN1O95832 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN1O95832 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN1O95832 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN1O95832 DUX4L19-201ENST00000557448 1267 ntBASIC20.59■□□□□ 0.89
CLDN1O95832 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.59■□□□□ 0.89
CLDN1O95832 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.59■□□□□ 0.89
CLDN1O95832 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.59■□□□□ 0.89
CLDN1O95832 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN1O95832 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
CLDN1O95832 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLDN1O95832 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN1O95832 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN1O95832 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.58■□□□□ 0.89
CLDN1O95832 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
CLDN1O95832 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN1O95832 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN1O95832 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.88
CLDN1O95832 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN1O95832 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN1O95832 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN1O95832 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN1O95832 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN1O95832 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN1O95832 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN1O95832 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN1O95832 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN1O95832 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 IRS3P-201ENST00000223076 1006 ntBASIC20.56■□□□□ 0.88
CLDN1O95832 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN1O95832 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLDN1O95832 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN1O95832 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN1O95832 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN1O95832 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN1O95832 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN1O95832 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN1O95832 AC022517.1-201ENST00000592429 346 ntBASIC20.55■□□□□ 0.88
CLDN1O95832 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN1O95832 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN1O95832 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN1O95832 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN1O95832 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN1O95832 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN1O95832 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN1O95832 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN1O95832 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN1O95832 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN1O95832 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN1O95832 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN1O95832 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN1O95832 AL137784.2-201ENST00000607332 1000 ntBASIC20.53■□□□□ 0.88
CLDN1O95832 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN1O95832 SYT6-210ENST00000641643 1587 ntBASIC20.53■□□□□ 0.88
CLDN1O95832 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN1O95832 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN1O95832 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN1O95832 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN1O95832 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN1O95832 AC027682.1-201ENST00000562846 899 ntBASIC20.52■□□□□ 0.88
CLDN1O95832 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN1O95832 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN1O95832 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CLDN1O95832 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN1O95832 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN1O95832 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN1O95832 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN1O95832 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLDN1O95832 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN1O95832 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CLDN1O95832 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLDN1O95832 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN1O95832 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN1O95832 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN1O95832 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.5■□□□□ 0.87
CLDN1O95832 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN1O95832 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN1O95832 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN1O95832 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN1O95832 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms