Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
GGPS1O95749 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.09■■□□□ 1.77
GGPS1O95749 AL139246.5-201ENST00000606645 996 ntBASIC26.09■■□□□ 1.77
GGPS1O95749 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.09■■□□□ 1.77
GGPS1O95749 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.09■■□□□ 1.77
GGPS1O95749 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
GGPS1O95749 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
GGPS1O95749 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
GGPS1O95749 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
GGPS1O95749 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
GGPS1O95749 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.08■■□□□ 1.77
GGPS1O95749 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
GGPS1O95749 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
GGPS1O95749 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
GGPS1O95749 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
GGPS1O95749 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
GGPS1O95749 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
GGPS1O95749 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
GGPS1O95749 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.07■■□□□ 1.76
GGPS1O95749 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.07■■□□□ 1.76
GGPS1O95749 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.07■■□□□ 1.76
GGPS1O95749 MIR638-201ENST00000385237 100 ntBASIC26.07■■□□□ 1.76
GGPS1O95749 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
GGPS1O95749 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.07■■□□□ 1.76
GGPS1O95749 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
GGPS1O95749 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.06■■□□□ 1.76
GGPS1O95749 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.06■■□□□ 1.76
GGPS1O95749 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
GGPS1O95749 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.06■■□□□ 1.76
GGPS1O95749 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
GGPS1O95749 MIR6089-201ENST00000616698 64 ntBASIC26.06■■□□□ 1.76
GGPS1O95749 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.06■■□□□ 1.76
GGPS1O95749 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
GGPS1O95749 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.05■■□□□ 1.76
GGPS1O95749 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
GGPS1O95749 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
GGPS1O95749 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
GGPS1O95749 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
GGPS1O95749 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
GGPS1O95749 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.04■■□□□ 1.76
GGPS1O95749 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
GGPS1O95749 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
GGPS1O95749 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
GGPS1O95749 AC110285.6-201ENST00000617652 491 ntBASIC26.03■■□□□ 1.76
GGPS1O95749 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.03■■□□□ 1.76
GGPS1O95749 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
GGPS1O95749 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
GGPS1O95749 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
GGPS1O95749 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
GGPS1O95749 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
GGPS1O95749 AC096631.2-201ENST00000436136 790 ntBASIC26.02■■□□□ 1.76
GGPS1O95749 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.02■■□□□ 1.76
GGPS1O95749 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
GGPS1O95749 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
GGPS1O95749 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
GGPS1O95749 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
GGPS1O95749 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
GGPS1O95749 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
GGPS1O95749 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
GGPS1O95749 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.01■■□□□ 1.75
GGPS1O95749 AC131274.2-201ENST00000580697 1507 ntBASIC26.01■■□□□ 1.75
GGPS1O95749 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26■■□□□ 1.75
GGPS1O95749 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26■■□□□ 1.75
GGPS1O95749 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
GGPS1O95749 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
GGPS1O95749 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
GGPS1O95749 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.99■■□□□ 1.75
GGPS1O95749 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
GGPS1O95749 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
GGPS1O95749 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.98■■□□□ 1.75
GGPS1O95749 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
GGPS1O95749 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
GGPS1O95749 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
GGPS1O95749 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.97■■□□□ 1.75
GGPS1O95749 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
GGPS1O95749 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.96■■□□□ 1.75
GGPS1O95749 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.96■■□□□ 1.75
GGPS1O95749 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
GGPS1O95749 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.95■■□□□ 1.74
GGPS1O95749 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.95■■□□□ 1.74
GGPS1O95749 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
GGPS1O95749 AC005703.6-201ENST00000623265 1329 ntBASIC25.94■■□□□ 1.74
GGPS1O95749 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
GGPS1O95749 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
GGPS1O95749 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
GGPS1O95749 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
GGPS1O95749 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
GGPS1O95749 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.93■■□□□ 1.74
GGPS1O95749 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.93■■□□□ 1.74
GGPS1O95749 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
GGPS1O95749 AC135731.1-201ENST00000569415 2548 ntBASIC25.93■■□□□ 1.74
GGPS1O95749 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
GGPS1O95749 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms