Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT1O95170 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT1O95170 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDRT1O95170 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT1O95170 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDRT1O95170 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT1O95170 AC126177.7-201ENST00000547904 679 ntBASIC20.52■□□□□ 0.88
CDRT1O95170 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.52■□□□□ 0.88
CDRT1O95170 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDRT1O95170 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDRT1O95170 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 MIR3648-2-201ENST00000581792 180 ntBASIC20.51■□□□□ 0.87
CDRT1O95170 MIR3648-1-201ENST00000615959 180 ntBASIC20.51■□□□□ 0.87
CDRT1O95170 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.51■□□□□ 0.87
CDRT1O95170 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT1O95170 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT1O95170 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT1O95170 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.5■□□□□ 0.87
CDRT1O95170 HLA-L-211ENST00000482052 1765 ntBASIC20.5■□□□□ 0.87
CDRT1O95170 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.5■□□□□ 0.87
CDRT1O95170 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT1O95170 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.5■□□□□ 0.87
CDRT1O95170 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT1O95170 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDRT1O95170 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
CDRT1O95170 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDRT1O95170 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT1O95170 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDRT1O95170 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CDRT1O95170 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.49■□□□□ 0.87
CDRT1O95170 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.49■□□□□ 0.87
CDRT1O95170 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT1O95170 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT1O95170 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDRT1O95170 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT1O95170 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.48■□□□□ 0.87
CDRT1O95170 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT1O95170 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDRT1O95170 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDRT1O95170 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT1O95170 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT1O95170 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT1O95170 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.47■□□□□ 0.87
CDRT1O95170 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDRT1O95170 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT1O95170 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT1O95170 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT1O95170 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT1O95170 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDRT1O95170 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.46■□□□□ 0.87
CDRT1O95170 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT1O95170 AC016575.1-201ENST00000607026 382 ntBASIC20.46■□□□□ 0.87
CDRT1O95170 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT1O95170 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CDRT1O95170 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT1O95170 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDRT1O95170 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.44■□□□□ 0.86
CDRT1O95170 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.44■□□□□ 0.86
CDRT1O95170 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.44■□□□□ 0.86
CDRT1O95170 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.44■□□□□ 0.86
CDRT1O95170 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT1O95170 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDRT1O95170 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.43■□□□□ 0.86
CDRT1O95170 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms