Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.77■□□□□ 0.6
SCAF4O95104 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAF4O95104 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCAF4O95104 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAF4O95104 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SCAF4O95104 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SCAF4O95104 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAF4O95104 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCAF4O95104 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCAF4O95104 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCAF4O95104 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAF4O95104 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCAF4O95104 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCAF4O95104 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SCAF4O95104 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.75■□□□□ 0.59
SCAF4O95104 GPX1-201ENST00000419349 1106 ntBASIC18.75■□□□□ 0.59
SCAF4O95104 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.75■□□□□ 0.59
SCAF4O95104 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SCAF4O95104 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCAF4O95104 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCAF4O95104 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SCAF4O95104 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCAF4O95104 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCAF4O95104 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCAF4O95104 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCAF4O95104 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCAF4O95104 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCAF4O95104 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCAF4O95104 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.74■□□□□ 0.59
SCAF4O95104 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCAF4O95104 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SCAF4O95104 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SCAF4O95104 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCAF4O95104 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCAF4O95104 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SCAF4O95104 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCAF4O95104 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.73■□□□□ 0.59
SCAF4O95104 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SCAF4O95104 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
SCAF4O95104 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCAF4O95104 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCAF4O95104 PKD1P6-201ENST00000343738 4769 ntBASIC18.73■□□□□ 0.59
SCAF4O95104 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCAF4O95104 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCAF4O95104 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.72■□□□□ 0.59
SCAF4O95104 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.72■□□□□ 0.59
SCAF4O95104 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SCAF4O95104 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.72■□□□□ 0.59
SCAF4O95104 HSD17B1P1-201ENST00000590052 955 ntBASIC18.72■□□□□ 0.59
SCAF4O95104 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCAF4O95104 AL117328.2-201ENST00000624617 1940 ntBASIC18.72■□□□□ 0.59
SCAF4O95104 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCAF4O95104 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCAF4O95104 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCAF4O95104 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCAF4O95104 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCAF4O95104 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCAF4O95104 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SCAF4O95104 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCAF4O95104 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
SCAF4O95104 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.71■□□□□ 0.59
SCAF4O95104 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.7■□□□□ 0.58
SCAF4O95104 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.7■□□□□ 0.58
SCAF4O95104 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCAF4O95104 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCAF4O95104 AC060814.1-201ENST00000554326 538 ntBASIC18.7■□□□□ 0.58
SCAF4O95104 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCAF4O95104 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCAF4O95104 C9orf163-202ENST00000624034 2573 ntBASIC18.7■□□□□ 0.58
SCAF4O95104 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SCAF4O95104 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SCAF4O95104 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SCAF4O95104 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.69■□□□□ 0.58
SCAF4O95104 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.69■□□□□ 0.58
SCAF4O95104 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.69■□□□□ 0.58
SCAF4O95104 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SCAF4O95104 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.69■□□□□ 0.58
SCAF4O95104 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.69■□□□□ 0.58
SCAF4O95104 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SCAF4O95104 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
SCAF4O95104 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SCAF4O95104 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SCAF4O95104 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.68■□□□□ 0.58
SCAF4O95104 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCAF4O95104 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SCAF4O95104 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.68■□□□□ 0.58
SCAF4O95104 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCAF4O95104 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.68■□□□□ 0.58
SCAF4O95104 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms