Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SHOXO15266 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.57■□□□□ 0.72
SHOXO15266 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHOXO15266 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SHOXO15266 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHOXO15266 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHOXO15266 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.56■□□□□ 0.72
SHOXO15266 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHOXO15266 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SHOXO15266 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SHOXO15266 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SHOXO15266 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
SHOXO15266 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.55■□□□□ 0.72
SHOXO15266 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.55■□□□□ 0.72
SHOXO15266 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHOXO15266 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SHOXO15266 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.54■□□□□ 0.72
SHOXO15266 AC096887.2-201ENST00000623443 1957 ntBASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHOXO15266 DUSP8P3-201ENST00000399571 1760 ntBASIC19.54■□□□□ 0.72
SHOXO15266 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SHOXO15266 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.53■□□□□ 0.72
SHOXO15266 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.53■□□□□ 0.72
SHOXO15266 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHOXO15266 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHOXO15266 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHOXO15266 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.52■□□□□ 0.72
SHOXO15266 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHOXO15266 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHOXO15266 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SHOXO15266 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SHOXO15266 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.52■□□□□ 0.71
SHOXO15266 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHOXO15266 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
SHOXO15266 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SHOXO15266 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.51■□□□□ 0.71
SHOXO15266 MIR639-201ENST00000384974 98 ntBASIC19.51■□□□□ 0.71
SHOXO15266 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.51■□□□□ 0.71
SHOXO15266 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHOXO15266 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.51■□□□□ 0.71
SHOXO15266 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHOXO15266 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHOXO15266 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHOXO15266 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.5■□□□□ 0.71
SHOXO15266 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.5■□□□□ 0.71
SHOXO15266 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SHOXO15266 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SHOXO15266 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.49■□□□□ 0.71
SHOXO15266 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
SHOXO15266 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.49■□□□□ 0.71
SHOXO15266 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHOXO15266 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms