Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA2E9PIF3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPA2E9PIF3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.03■□□□□ 0.96
NPIPA2E9PIF3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPA2E9PIF3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA2E9PIF3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA2E9PIF3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.02■□□□□ 0.96
NPIPA2E9PIF3 AL117332.1-201ENST00000622628 974 ntBASIC21.02■□□□□ 0.96
NPIPA2E9PIF3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.02■□□□□ 0.96
NPIPA2E9PIF3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA2E9PIF3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA2E9PIF3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NPIPA2E9PIF3 AC022211.4-201ENST00000625094 2161 ntBASIC21.02■□□□□ 0.95
NPIPA2E9PIF3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NPIPA2E9PIF3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA2E9PIF3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA2E9PIF3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA2E9PIF3 AC131281.2-201ENST00000520478 145 ntBASIC21■□□□□ 0.95
NPIPA2E9PIF3 AL356740.2-201ENST00000601559 647 ntBASIC21■□□□□ 0.95
NPIPA2E9PIF3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPIPA2E9PIF3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA2E9PIF3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 MIR3621-201ENST00000580529 85 ntBASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 AC142381.3-201ENST00000568208 1670 ntBASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA2E9PIF3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA2E9PIF3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 AL136116.3-201ENST00000402907 1138 ntBASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA2E9PIF3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.96■□□□□ 0.95
NPIPA2E9PIF3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA2E9PIF3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms