Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 MIR4508-201ENST00000584178 70 ntBASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM6-TRIM34B2RNG4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 THA1P-201ENST00000590384 1145 ntBASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM6-TRIM34B2RNG4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM6-TRIM34B2RNG4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM6-TRIM34B2RNG4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TRIM6-TRIM34B2RNG4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRIM6-TRIM34B2RNG4 YBX1P4-201ENST00000392794 808 ntBASIC28.2■■■□□ 2.1
TRIM6-TRIM34B2RNG4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM6-TRIM34B2RNG4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 ABCB10P4-201ENST00000566803 2184 ntBASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 KRT18P24-201ENST00000344739 1156 ntBASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM6-TRIM34B2RNG4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.18■■■□□ 2.1
TRIM6-TRIM34B2RNG4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.17■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.17■■■□□ 2.1
TRIM6-TRIM34B2RNG4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM6-TRIM34B2RNG4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM6-TRIM34B2RNG4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM6-TRIM34B2RNG4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM6-TRIM34B2RNG4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.16■■■□□ 2.1
TRIM6-TRIM34B2RNG4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM6-TRIM34B2RNG4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM6-TRIM34B2RNG4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM6-TRIM34B2RNG4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM6-TRIM34B2RNG4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM6-TRIM34B2RNG4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
TRIM6-TRIM34B2RNG4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM6-TRIM34B2RNG4 AC103724.3-201ENST00000564481 992 ntBASIC28.14■■■□□ 2.1
TRIM6-TRIM34B2RNG4 MIR4281-201ENST00000580852 62 ntBASIC28.14■■■□□ 2.1
TRIM6-TRIM34B2RNG4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM6-TRIM34B2RNG4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
TRIM6-TRIM34B2RNG4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TRIM6-TRIM34B2RNG4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
TRIM6-TRIM34B2RNG4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRIM6-TRIM34B2RNG4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRIM6-TRIM34B2RNG4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.11■■■□□ 2.09
TRIM6-TRIM34B2RNG4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRIM6-TRIM34B2RNG4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC28.11■■■□□ 2.09
TRIM6-TRIM34B2RNG4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRIM6-TRIM34B2RNG4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM6-TRIM34B2RNG4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM6-TRIM34B2RNG4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
TRIM6-TRIM34B2RNG4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.1■■■□□ 2.09
TRIM6-TRIM34B2RNG4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
TRIM6-TRIM34B2RNG4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.09■■■□□ 2.09
TRIM6-TRIM34B2RNG4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms