Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYRM9A8MSI8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 AC141586.4-201ENST00000624558 1573 ntBASIC16.49■□□□□ 0.23
LYRM9A8MSI8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYRM9A8MSI8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYRM9A8MSI8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.47■□□□□ 0.23
LYRM9A8MSI8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYRM9A8MSI8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 AC092028.1-203ENST00000608262 953 ntBASIC16.46■□□□□ 0.23
LYRM9A8MSI8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LYRM9A8MSI8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
LYRM9A8MSI8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 AC004448.1-201ENST00000458332 883 ntBASIC16.45■□□□□ 0.22
LYRM9A8MSI8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
LYRM9A8MSI8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LYRM9A8MSI8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 SNX5-217ENST00000606557 1087 ntBASIC16.43■□□□□ 0.22
LYRM9A8MSI8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 AC131274.2-201ENST00000580697 1507 ntBASIC16.43■□□□□ 0.22
LYRM9A8MSI8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYRM9A8MSI8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 GUSBP5-201ENST00000418136 578 ntBASIC16.42■□□□□ 0.22
LYRM9A8MSI8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 MTDHP2-201ENST00000601468 714 ntBASIC16.42■□□□□ 0.22
LYRM9A8MSI8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYRM9A8MSI8 AL139125.2-201ENST00000623134 1869 ntBASIC16.42■□□□□ 0.22
LYRM9A8MSI8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms