Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-6A6NCS4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NKX2-6A6NCS4 AC020928.2-201ENST00000588717 2197 ntBASIC20.53■□□□□ 0.88
NKX2-6A6NCS4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.53■□□□□ 0.88
NKX2-6A6NCS4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NKX2-6A6NCS4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 AL136162.1-201ENST00000607711 1078 ntBASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-6A6NCS4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 ERN1-208ENST00000606895 2068 ntBASIC20.5■□□□□ 0.87
NKX2-6A6NCS4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NKX2-6A6NCS4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.49■□□□□ 0.87
NKX2-6A6NCS4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NKX2-6A6NCS4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.49■□□□□ 0.87
NKX2-6A6NCS4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NKX2-6A6NCS4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NKX2-6A6NCS4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 RARRES2P6-201ENST00000567333 442 ntBASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 AC096887.2-201ENST00000623443 1957 ntBASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX2-6A6NCS4 AC097639.1-201ENST00000565519 1891 ntBASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 AC135279.3-201ENST00000610945 1311 ntBASIC20.47■□□□□ 0.87
NKX2-6A6NCS4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.46■□□□□ 0.87
NKX2-6A6NCS4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 AL031432.3-201ENST00000607698 485 ntBASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
NKX2-6A6NCS4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 AC024257.2-201ENST00000549699 147 ntBASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX2-6A6NCS4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 SUDS3P1-201ENST00000505831 966 ntBASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX2-6A6NCS4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms