Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 RPS2P7-201ENST00000447334 885 ntBASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV9S1A1TA0A576 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV9S1A1TA0A576 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV9S1A1TA0A576 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 AC090877.2-201ENST00000558441 1738 ntBASIC23.25■■□□□ 1.31
TCRBV9S1A1TA0A576 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TCRBV9S1A1TA0A576 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 SPCS2P3-201ENST00000500401 656 ntBASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 RNF126P1-201ENST00000567452 1320 ntBASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.23■■□□□ 1.31
TCRBV9S1A1TA0A576 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV9S1A1TA0A576 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV9S1A1TA0A576 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 AL592293.1-201ENST00000502889 1188 ntBASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 AC018755.3-202ENST00000596210 929 ntBASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV9S1A1TA0A576 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV9S1A1TA0A576 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms