Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-4A0A1B0GX49 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRBV6-4A0A1B0GX49 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-4A0A1B0GX49 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRBV6-4A0A1B0GX49 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 AC012354.3-201ENST00000623734 483 ntBASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
TRBV6-4A0A1B0GX49 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 AL022069.1-201ENST00000568025 1636 ntBASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-4A0A1B0GX49 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 ABCB10P4-201ENST00000566803 2184 ntBASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-4A0A1B0GX49 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-4A0A1B0GX49 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 KRT18P24-201ENST00000344739 1156 ntBASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV6-4A0A1B0GX49 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-4A0A1B0GX49 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV6-4A0A1B0GX49 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-4A0A1B0GX49 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV6-4A0A1B0GX49 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV6-4A0A1B0GX49 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-4A0A1B0GX49 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms