Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-9A0A0J9YWB2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-9A0A0J9YWB2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-9A0A0J9YWB2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-9A0A0J9YWB2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 AL592295.1-201ENST00000400984 884 ntBASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV7-9A0A0J9YWB2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 AC090877.2-201ENST00000558441 1738 ntBASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV7-9A0A0J9YWB2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 AC087393.1-201ENST00000582896 145 ntBASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV7-9A0A0J9YWB2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV7-9A0A0J9YWB2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ABCB10P4-201ENST00000566803 2184 ntBASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV7-9A0A0J9YWB2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV7-9A0A0J9YWB2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms