Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 AC129492.7-201ENST00000622992 756 ntBASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV12-3A0A0B4J271 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRAV12-3A0A0B4J271 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 KRT18P60-201ENST00000312876 1297 ntBASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-3A0A0B4J271 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 AL592295.1-201ENST00000400984 884 ntBASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-3A0A0B4J271 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRAV12-3A0A0B4J271 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 AC090877.2-201ENST00000558441 1738 ntBASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 ABHD17AP5-201ENST00000580133 923 ntBASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV12-3A0A0B4J271 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-3A0A0B4J271 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 DUX4L18-201ENST00000553347 1267 ntBASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-3A0A0B4J271 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 AC139795.1-202ENST00000500444 432 ntBASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 NTF6A-201ENST00000591175 560 ntBASIC17.02■□□□□ 0.32
TRAV12-3A0A0B4J271 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms