Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.56■□□□□ 0.24
TRAV4A0A0B4J268 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV4A0A0B4J268 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 AC019171.1-201ENST00000601251 1056 ntBASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV4A0A0B4J268 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 AC022616.5-201ENST00000518796 181 ntBASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV4A0A0B4J268 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 DUX4L18-201ENST00000553347 1267 ntBASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 AC011551.1-201ENST00000614101 683 ntBASIC16.52■□□□□ 0.24
TRAV4A0A0B4J268 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV4A0A0B4J268 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV4A0A0B4J268 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV4A0A0B4J268 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV4A0A0B4J268 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV4A0A0B4J268 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV4A0A0B4J268 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV4A0A0B4J268 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV4A0A0B4J268 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV4A0A0B4J268 BHLHE23-202ENST00000612929 1109 ntBASIC16.5■□□□□ 0.23
TRAV4A0A0B4J268 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV4A0A0B4J268 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV4A0A0B4J268 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 ATP5G2P3-201ENST00000429083 425 ntBASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 AC074183.2-201ENST00000623112 922 ntBASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 AC004812.2-201ENST00000611079 2094 ntBASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV4A0A0B4J268 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV4A0A0B4J268 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV4A0A0B4J268 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms